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  5. Cre19.g751197

Cre19.g751197


No description available


Gene families : OG0004428 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004428_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre19.g751197

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00264760 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT2G34357 No alias ARM repeat superfamily protein 0.17 OrthoFinder output from all 47 species
Adi_g021099 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g13675 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07501 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g05321 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.18G047800.1 Ceric.18G047800 not classified & original description: pacid=50622555... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020554.42 No alias No description available 0.09 OrthoFinder output from all 47 species
Dcu_g11589 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01023097001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_09813 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os02g54110.1 LOC_Os02g54110 no hits & (original description: none) 0.17 OrthoFinder output from all 47 species
Len_g20663 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07438 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10433024g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_55053g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Mp1g25050.1 No alias no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
Msp_g16189 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g36824 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g20752 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c2_3190V3.1 Pp3c2_3190 ARM repeat superfamily protein 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0038.g012003 No alias not classified & original description: CDS=123-3902 0.03 OrthoFinder output from all 47 species
Sam_g16187 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo78845 No alias No description available 0.05 OrthoFinder output from all 47 species
Solyc07g042380.4.1 Solyc07g042380 no hits & (original description: none) 0.13 OrthoFinder output from all 47 species
Spa_g29647 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e016059_P003 Zm00001e016059 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR012978 RRP12-like_dom 416 649
No external refs found!