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  5. Cre17.g726650

Cre17.g726650


No description available


Gene families : OG0005949 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005949_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre17.g726650
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AT1G02870 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.04 OrthoFinder output from all 47 species
Gb_09459 No alias pre-60S ribosomal subunit assembly factor (NOP16) 0.02 OrthoFinder output from all 47 species
LOC_Os05g30420.1 LOC_Os05g30420 pre-60S ribosomal subunit assembly factor (NOP16) 0.03 OrthoFinder output from all 47 species
Lfl_g00105 No alias pre-60S ribosomal subunit assembly factor *(NOP16) &... 0.02 OrthoFinder output from all 47 species
Mp1g07200.1 No alias pre-60S ribosomal subunit assembly factor (NOP16) 0.04 OrthoFinder output from all 47 species
Nbi_g00310 No alias pre-60S ribosomal subunit assembly factor *(NOP16) &... 0.02 OrthoFinder output from all 47 species
Pir_g11993 No alias pre-60S ribosomal subunit assembly factor *(NOP16) &... 0.01 OrthoFinder output from all 47 species
Pp3c25_320V3.1 Pp3c25_320 No annotation 0.02 OrthoFinder output from all 47 species
Solyc09g075030.3.1 Solyc09g075030 pre-60S ribosomal subunit assembly factor (NOP16) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008252 nucleotidase activity IEP HCCA
MF GO:0008253 5'-nucleotidase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009116 nucleoside metabolic process IEP HCCA
BP GO:0009166 nucleotide catabolic process IEP HCCA
BP GO:0009262 deoxyribonucleotide metabolic process IEP HCCA
BP GO:0009264 deoxyribonucleotide catabolic process IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901292 nucleoside phosphate catabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1901657 glycosyl compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR019002 Ribosome_biogenesis_Nop16 81 168
No external refs found!