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  5. Cre16.g688750

Cre16.g688750 (SMU2)


Aliases : SMU2

Description : Suppressor of mec-8 and unc-52 protein homolog 2 OS=Arabidopsis thaliana


Gene families : OG0004764 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004764_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre16.g688750

Target Alias Description ECC score Gene Family Method Actions
Aop_g29624 SMU2 component *(SMU2) of SMU splicing factor complex &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene48486.t1 SMU2, Aspi01Gene48486 component *(SMU2) of SMU splicing factor complex &... 0.01 OrthoFinder output from all 47 species
Ceric.15G055900.1 SMU2, Ceric.15G055900 component *(SMU2) of SMU splicing factor complex &... 0.07 OrthoFinder output from all 47 species
Dcu_g04765 SMU2 component *(SMU2) of SMU splicing factor complex &... 0.02 OrthoFinder output from all 47 species
Ehy_g01347 SMU2 component *(SMU2) of SMU splicing factor complex &... 0.01 OrthoFinder output from all 47 species
LOC_Os11g04950.1 SMU2, LOC_Os11g04950 Suppressor of mec-8 and unc-52 protein homolog 2... 0.03 OrthoFinder output from all 47 species
MA_713g0010 SMU2 Suppressor of mec-8 and unc-52 protein homolog 2... 0.02 OrthoFinder output from all 47 species
Mp5g17010.1 SMU2 Suppressor of mec-8 and unc-52 protein homolog 2... 0.03 OrthoFinder output from all 47 species
Pir_g11768 SMU2 component *(SMU2) of SMU splicing factor complex &... 0.01 OrthoFinder output from all 47 species
Smo122486 SMU2 Suppressor of mec-8 and unc-52 protein homolog 2... 0.02 OrthoFinder output from all 47 species
Solyc07g017490.3.1 SMU2, Solyc07g017490 Suppressor of mec-8 and unc-52 protein homolog 2... 0.04 OrthoFinder output from all 47 species
Zm00001e039187_P001 SMU2, Zm00001e039187 Suppressor of mec-8 and unc-52 protein homolog 2... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000228 nuclear chromosome IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005694 chromosome IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR012492 RED_C 510 626
IPR012916 RED_N 52 297
No external refs found!