1. Home
  2. Species
  3. Chlamydomonas reinhardtii
  4. Sequence
  5. Cre16.g687301

Cre16.g687301 (BTAF1, RGD3, CHA16,...)


Aliases : BTAF1, RGD3, CHA16, ATBTAF1, CHR16

Description : RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TATA box-binding protein (TBP) regulation.TBP-associated factor (MOT1)


Gene families : OG0004296 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004296_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre16.g687301

Target Alias Description ECC score Gene Family Method Actions
AT3G54280 BTAF1, RGD3,... DNA binding;ATP binding;nucleic acid... 0.05 OrthoFinder output from all 47 species
Adi_g086270 BTAF1, RGD3,... TATA box-binding protein-associated factor *(MOT1) &... 0.02 OrthoFinder output from all 47 species
Aev_g04198 BTAF1, RGD3,... TATA box-binding protein-associated factor *(MOT1) &... 0.02 OrthoFinder output from all 47 species
Aob_g12460 BTAF1, RGD3,... TATA box-binding protein-associated factor *(MOT1) &... 0.02 OrthoFinder output from all 47 species
Aop_g70865 BTAF1, RGD3,... TATA box-binding protein-associated factor *(MOT1) &... 0.03 OrthoFinder output from all 47 species
Ceric.27G041200.1 BTAF1, RGD3,... TATA box-binding protein-associated factor *(MOT1) &... 0.02 OrthoFinder output from all 47 species
Dcu_g03219 BTAF1, RGD3,... TATA box-binding protein-associated factor *(MOT1) &... 0.03 OrthoFinder output from all 47 species
Dde_g14787 BTAF1, RGD3,... TATA box-binding protein-associated factor *(MOT1) &... 0.03 OrthoFinder output from all 47 species
Ehy_g09279 BTAF1, RGD3,... TATA box-binding protein-associated factor *(MOT1) &... 0.02 OrthoFinder output from all 47 species
GSVIVT01019359001 BTAF1, RGD3,... RNA biosynthesis.RNA polymerase II-dependent... 0.02 OrthoFinder output from all 47 species
Gb_19667 BTAF1, RGD3,... chromatin remodeling factor (Mot1). TATA box-binding... 0.03 OrthoFinder output from all 47 species
Lfl_g35777 BTAF1, RGD3,... TATA box-binding protein-associated factor *(MOT1) &... 0.02 OrthoFinder output from all 47 species
MA_10431148g0010 BTAF1, RGD3,... TATA-binding protein-associated factor BTAF1... 0.02 OrthoFinder output from all 47 species
Nbi_g03223 BTAF1, RGD3,... TATA box-binding protein-associated factor *(MOT1) &... 0.02 OrthoFinder output from all 47 species
Pir_g09833 BTAF1, RGD3,... TATA box-binding protein-associated factor *(MOT1) &... 0.02 OrthoFinder output from all 47 species
Sam_g29302 No alias TATA box-binding protein-associated factor *(MOT1) &... 0.02 OrthoFinder output from all 47 species
Smo186944 BTAF1, RGD3,... RNA biosynthesis.RNA polymerase II-dependent... 0.03 OrthoFinder output from all 47 species
Solyc08g074510.1.1 BTAF1, RGD3,... TATA-binding protein-associated factor BTAF1... 0.03 OrthoFinder output from all 47 species
Solyc08g074520.2.1 BTAF1, RGD3,... TATA-binding protein-associated factor BTAF1... 0.03 OrthoFinder output from all 47 species
Zm00001e032564_P001 BTAF1, RGD3,... chromatin remodeling factor (Mot1). TATA box-binding... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR000330 SNF2_N 1112 1458
IPR022707 Mot1_central_dom 654 906
IPR001650 Helicase_C 1555 1654
IPR000357 HEAT 1032 1059
No external refs found!