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  5. Cre16.g685900

Cre16.g685900 (PRMT3, ATPRMT3)


Aliases : PRMT3, ATPRMT3

Description : Protein biosynthesis.cytosolic ribosome.ribosome assembly.ribosomal protein arginine N-methyltransferase (PRMT3)


Gene families : OG0001088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001088_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre16.g685900
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00036p00239020 ATPRMT11,... Chromatin organisation.histone modifications.histone... 0.02 OrthoFinder output from all 47 species
AT2G19670 PRMT1A, ATPRMT1A protein arginine methyltransferase 1A 0.04 OrthoFinder output from all 47 species
AT3G12270 PRMT3, ATPRMT3 protein arginine methyltransferase 3 0.14 OrthoFinder output from all 47 species
AT4G29510 ATPRMT11,... arginine methyltransferase 11 0.07 OrthoFinder output from all 47 species
Adi_g078469 ATPRMT11,... histone methylase *(PRMT1) & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g078470 ATPRMT11,... histone methylase *(PRMT1) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g16146 ATPRMT6, PRMT6 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g30276 PRMT3, ATPRMT3 ribosomal protein arginine N-methyltransferase *(PRMT3)... 0.01 OrthoFinder output from all 47 species
Ala_g22341 PRMT3, ATPRMT3 ribosomal protein arginine N-methyltransferase *(PRMT3)... 0.02 OrthoFinder output from all 47 species
Aop_g10441 ATPRMT11,... histone methylase *(PRMT1) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g10678 PRMT3, ATPRMT3 ribosomal protein arginine N-methyltransferase *(PRMT3)... 0.01 OrthoFinder output from all 47 species
Aspi01Gene06078.t1 ATPRMT6, PRMT6,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0006.g009862 ATPRMT11,... histone methylase *(PRMT1) & original description: CDS=2-1123 0.02 OrthoFinder output from all 47 species
Azfi_s0371.g067130 ATPRMT6, PRMT6 not classified & original description: CDS=379-1746 0.01 OrthoFinder output from all 47 species
Azfi_s0553.g076649 PRMT3, ATPRMT3 ribosomal protein arginine N-methyltransferase *(PRMT3)... 0.08 OrthoFinder output from all 47 species
Cba_g15183 ATPRMT11,... histone methylase *(PRMT1) & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.05G067400.1 PRMT3, ATPRMT3,... ribosomal protein arginine N-methyltransferase *(PRMT3)... 0.05 OrthoFinder output from all 47 species
Ceric.36G007700.1 ATPRMT11,... histone methylase *(PRMT1) & original description:... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001049.36 PRMT1A, ATPRMT1A Probable protein arginine N-methyltransferase 1.2... 0.04 OrthoFinder output from all 47 species
Dcu_g01884 ATPRMT6, PRMT6 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g11233 PRMT3, ATPRMT3 ribosomal protein arginine N-methyltransferase *(PRMT3)... 0.04 OrthoFinder output from all 47 species
Dde_g04778 ATPRMT11,... histone methylase *(PRMT1) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01036648001 PRMT3, ATPRMT3 Protein biosynthesis.cytosolic ribosome.ribosome... 0.2 OrthoFinder output from all 47 species
Gb_03001 ATPRMT6, PRMT6 Probable protein arginine N-methyltransferase 6... 0.05 OrthoFinder output from all 47 species
Gb_15769 ATPRMT11,... histone methylase (PRMT1) 0.05 OrthoFinder output from all 47 species
Gb_34867 PRMT3, ATPRMT3 ribosomal protein arginine N-methyltransferase (PRMT3) 0.04 OrthoFinder output from all 47 species
LOC_Os04g58060.1 ATPRMT6, PRMT6,... Probable protein arginine N-methyltransferase 6.1... 0.03 OrthoFinder output from all 47 species
LOC_Os07g44640.1 PRMT3, ATPRMT3,... ribosomal protein arginine N-methyltransferase (PRMT3) 0.09 OrthoFinder output from all 47 species
LOC_Os09g19560.1 ATPRMT11,... histone methylase (PRMT1) 0.13 OrthoFinder output from all 47 species
LOC_Os10g34740.1 ATPRMT6, PRMT6,... Probable protein arginine N-methyltransferase 6.2... 0.04 OrthoFinder output from all 47 species
Len_g22488 PRMT3, ATPRMT3 ribosomal protein arginine N-methyltransferase *(PRMT3)... 0.01 OrthoFinder output from all 47 species
Lfl_g12990 ATPRMT11,... histone methylase *(PRMT1) & original description: none 0.01 OrthoFinder output from all 47 species
MA_10436659g0010 ATPRMT6, PRMT6 Probable protein arginine N-methyltransferase 6... 0.02 OrthoFinder output from all 47 species
MA_4448g0020 ATPRMT11,... Probable protein arginine N-methyltransferase 1 OS=Oryza... 0.04 OrthoFinder output from all 47 species
MA_6268g0020 PRMT3, ATPRMT3 Probable protein arginine N-methyltransferase 3 OS=Oryza... 0.06 OrthoFinder output from all 47 species
Mp5g00320.1 ATPRMT11,... histone methylase (PRMT1) 0.06 OrthoFinder output from all 47 species
Mp5g14740.1 PRMT3, ATPRMT3 ribosomal protein arginine N-methyltransferase (PRMT3) 0.07 OrthoFinder output from all 47 species
Ore_g36048 PRMT3, ATPRMT3 ribosomal protein arginine N-methyltransferase *(PRMT3)... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0088.g018602 ATPRMT11,... histone methylase *(PRMT1) & original description: CDS=1-1554 0.05 OrthoFinder output from all 47 species
Sam_g09560 No alias histone methylase *(PRMT1) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g18393 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g26734 No alias ribosomal protein arginine N-methyltransferase *(PRMT3)... 0.03 OrthoFinder output from all 47 species
Smo95789 PRMT3, ATPRMT3 Protein biosynthesis.cytosolic ribosome.ribosome... 0.03 OrthoFinder output from all 47 species
Solyc01g096550.3.1 PRMT3, ATPRMT3,... ribosomal protein arginine N-methyltransferase (PRMT3) 0.16 OrthoFinder output from all 47 species
Solyc07g032240.3.1 ATPRMT11,... histone methylase (PRMT1) 0.04 OrthoFinder output from all 47 species
Solyc12g008760.3.1 ATPRMT11,... histone methylase (PRMT1) 0.1 OrthoFinder output from all 47 species
Tin_g05071 ATPRMT11,... histone methylase *(PRMT1) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e033500_P001 PRMT3, ATPRMT3,... ribosomal protein arginine N-methyltransferase (PRMT3) 0.11 OrthoFinder output from all 47 species
Zm00001e033907_P001 ATPRMT11,... histone methylase (PRMT1) 0.12 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0030490 maturation of SSU-rRNA IEP HCCA
MF GO:0030515 snoRNA binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!