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  5. Cre16.g662852

Cre16.g662852


No description available


Gene families : OG0003984 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003984_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre16.g662852
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
Aev_g07826 EMB2776, LIS component *(PRPF4) of spliceosomal U4/U6 snRNP &... 0.01 OrthoFinder output from all 47 species
Cba_g10893 EMB2776, LIS component *(PRPF4) of spliceosomal U4/U6 snRNP &... 0.02 OrthoFinder output from all 47 species
LOC_Os03g23935.1 EMB2776, LIS,... protein factor PRPF4 of U4/U6 small nuclear... 0.02 OrthoFinder output from all 47 species
Mp1g23970.1 EMB2776, LIS protein factor PRPF4 of U4/U6 small nuclear... 0.04 OrthoFinder output from all 47 species
Solyc04g016510.3.1 EMB2776, LIS,... protein factor PRPF4 of U4/U6 small nuclear... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR014906 PRP4-like 43 64
No external refs found!