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  5. Cre16.g662150

Cre16.g662150 (CCB1)


Aliases : CCB1

Description : Photosynthesis.photophosphorylation.cytochrome b6/f complex.assembly.CCB cytochrome b6 maturation system (system IV).CCB1 component


Gene families : OG0006907 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006907_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre16.g662150

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00074040 CCB1,... Photosynthesis.photophosphorylation.cytochrome b6/f... 0.05 OrthoFinder output from all 47 species
AT3G26710 CCB1 cofactor assembly of complex C 0.09 OrthoFinder output from all 47 species
Aev_g08263 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.05 OrthoFinder output from all 47 species
Ala_g12011 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.11 OrthoFinder output from all 47 species
Als_g54717 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.07 OrthoFinder output from all 47 species
Aob_g20691 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.05 OrthoFinder output from all 47 species
Aop_g06853 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.04 OrthoFinder output from all 47 species
Aspi01Gene65930.t2 CCB1, Aspi01Gene65930 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.01 OrthoFinder output from all 47 species
Azfi_s0436.g069940 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.04 OrthoFinder output from all 47 species
Cba_g10743 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.06 OrthoFinder output from all 47 species
Ceric.22G072900.1 CCB1, Ceric.22G072900 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.07 OrthoFinder output from all 47 species
Dac_g22896 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.06 OrthoFinder output from all 47 species
Dcu_g02462 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.08 OrthoFinder output from all 47 species
Dde_g16667 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.02 OrthoFinder output from all 47 species
Ehy_g22554 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.04 OrthoFinder output from all 47 species
GSVIVT01032980001 CCB1 Photosynthesis.photophosphorylation.cytochrome b6/f... 0.03 OrthoFinder output from all 47 species
Gb_25718 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.03 OrthoFinder output from all 47 species
LOC_Os11g32320.1 CCB1, LOC_Os11g32320 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.05 OrthoFinder output from all 47 species
Len_g01063 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.06 OrthoFinder output from all 47 species
Lfl_g35581 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.01 OrthoFinder output from all 47 species
MA_10429833g0010 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.09 OrthoFinder output from all 47 species
Mp4g15480.1 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.02 OrthoFinder output from all 47 species
Nbi_g14152 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.04 OrthoFinder output from all 47 species
Ore_g11194 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.05 OrthoFinder output from all 47 species
Pir_g15644 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.09 OrthoFinder output from all 47 species
Pnu_g07222 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0028.g009830 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.07 OrthoFinder output from all 47 species
Sam_g18985 No alias assembly factor CCB1 of CCB cytochrome b6 maturation... 0.02 OrthoFinder output from all 47 species
Sam_g18986 No alias assembly factor CCB1 of CCB cytochrome b6 maturation... 0.04 OrthoFinder output from all 47 species
Solyc02g005210.3.1 CCB1, Solyc02g005210 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.03 OrthoFinder output from all 47 species
Spa_g05565 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.05 OrthoFinder output from all 47 species
Tin_g24718 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003747 translation release factor activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006415 translational termination IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR021919 CCB1 86 255
No external refs found!