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  5. Cre16.g658450

Cre16.g658450 (emb2738)


Aliases : emb2738

No description available


Gene families : OG0006217 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006217_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre16.g658450
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
AT3G12080 emb2738 GTP-binding family protein 0.03 OrthoFinder output from all 47 species
Adi_g055754 emb2738 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g25604 emb2738 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020780.28 emb2738 No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01025275001 emb2738 No description available 0.03 OrthoFinder output from all 47 species
LOC_Os11g41910.1 emb2738, LOC_Os11g41910 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp3g03840.1 emb2738 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g19178 emb2738 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0264.g026925 emb2738 not classified & original description: CDS=87-1838 0.01 OrthoFinder output from all 47 species
Zm00001e011327_P001 emb2738, Zm00001e011327 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR032859 KH_dom-like 177 259
IPR006073 GTP-bd 4 119
No external refs found!