1. Home
  2. Species
  3. Chlamydomonas reinhardtii
  4. Sequence
  5. Cre16.g654500

Cre16.g654500 (EIF2, AteIF3f, eIF3F)


Aliases : EIF2, AteIF3f, eIF3F

Description : Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3f component


Gene families : OG0004531 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004531_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre16.g654500
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00121720 EIF2, AteIF3f,... Protein biosynthesis.translation... 0.03 OrthoFinder output from all 47 species
AT2G39990 EIF2, AteIF3f, eIF3F eukaryotic translation initiation factor 2 0.07 OrthoFinder output from all 47 species
Adi_g125070 EIF2, AteIF3f, eIF3F component *(eIF3f) of eIF3 mRNA-to-PIC binding complex &... 0.01 OrthoFinder output from all 47 species
Azfi_s0754.g085338 EIF2, AteIF3f, eIF3F component *(eIF3f) of eIF3 mRNA-to-PIC binding complex &... 0.06 OrthoFinder output from all 47 species
Ceric.19G025600.1 EIF2, AteIF3f,... component *(eIF3f) of eIF3 mRNA-to-PIC binding complex &... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001355.7 EIF2, AteIF3f, eIF3F Protein biosynthesis.translation... 0.05 OrthoFinder output from all 47 species
Dcu_g43958 EIF2, AteIF3f, eIF3F component *(eIF3f) of eIF3 mRNA-to-PIC binding complex &... 0.01 OrthoFinder output from all 47 species
LOC_Os05g01450.1 EIF2, AteIF3f,... component eIF3f of eIF3 mRNA-to-PIC binding complex 0.07 OrthoFinder output from all 47 species
MA_10317483g0020 EIF2, AteIF3f, eIF3F component eIF3f of eIF3 mRNA-to-PIC binding complex 0.02 OrthoFinder output from all 47 species
MA_13553g0010 EIF2, AteIF3f, eIF3F component eIF3f of eIF3 mRNA-to-PIC binding complex 0.05 OrthoFinder output from all 47 species
Mp5g18020.1 EIF2, AteIF3f, eIF3F component eIF3f of eIF3 mRNA-to-PIC binding complex 0.11 OrthoFinder output from all 47 species
Nbi_g04161 EIF2, AteIF3f, eIF3F component *(eIF3f) of eIF3 mRNA-to-PIC binding complex &... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0051.g013945 EIF2, AteIF3f, eIF3F component *(eIF3f) of eIF3 mRNA-to-PIC binding complex &... 0.02 OrthoFinder output from all 47 species
Sam_g26051 No alias component *(eIF3f) of eIF3 mRNA-to-PIC binding complex &... 0.02 OrthoFinder output from all 47 species
Sam_g46829 No alias component *(eIF3f) of eIF3 mRNA-to-PIC binding complex &... 0.04 OrthoFinder output from all 47 species
Sam_g52178 No alias component *(eIF3f) of eIF3 mRNA-to-PIC binding complex &... 0.02 OrthoFinder output from all 47 species
Solyc11g013440.2.1 EIF2, AteIF3f,... component eIF3f of eIF3 mRNA-to-PIC binding complex 0.1 OrthoFinder output from all 47 species
Spa_g09311 EIF2, AteIF3f, eIF3F component *(eIF3f) of eIF3 mRNA-to-PIC binding complex &... 0.08 OrthoFinder output from all 47 species
Zm00001e027674_P001 EIF2, AteIF3f,... component eIF3f of eIF3 mRNA-to-PIC binding complex 0.03 OrthoFinder output from all 47 species
Zm00001e029699_P001 EIF2, AteIF3f,... component eIF3f of eIF3 mRNA-to-PIC binding complex 0.12 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000555 JAMM/MPN+_dom 12 117
IPR024969 Rpn11/EIF3F_C 167 282
No external refs found!