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  5. Cre13.g587000

Cre13.g587000


No description available


Gene families : OG0004356 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004356_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre13.g587000
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00111p00088150 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
Aev_g00974 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g10390 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g10827 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.11G058800.1 Ceric.11G058800 not classified & original description: pacid=50596365... 0.05 OrthoFinder output from all 47 species
Dcu_g01378 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g03709 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01018246001 No alias No description available 0.12 OrthoFinder output from all 47 species
Gb_33584 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g34200.1 LOC_Os01g34200 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Len_g24185 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10270008g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp1g01250.1 No alias no hits & (original description: none) 0.18 OrthoFinder output from all 47 species
Pnu_g25332 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g30167 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39745 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Smo415306 No alias No description available 0.06 OrthoFinder output from all 47 species
Solyc01g090470.3.1 Solyc01g090470 no hits & (original description: none) 0.14 OrthoFinder output from all 47 species
Zm00001e025603_P001 Zm00001e025603 no hits & (original description: none) 0.15 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
InterPro domains Description Start Stop
IPR012617 AATF_C 533 603
IPR025160 AATF 259 416
No external refs found!