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  5. Cre13.g583750

Cre13.g583750


Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase


Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre13.g583750

Target Alias Description ECC score Gene Family Method Actions
AT1G04360 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G42200 No alias RING/U-box superfamily protein 0.01 OrthoFinder output from all 47 species
Adi_g012488 RHA3A not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g069237 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Adi_g091869 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aev_g02496 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Als_g52149 ATL5 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g03297 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Aop_g07686 ATL6 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Cba_g43673 No alias E3 ubiquitin ligase *(BRH) & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.38G066400.1 Ceric.38G066400 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001286.17 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder output from all 47 species
Dde_g11694 ATL43 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g24472 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
GSVIVT01009096001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
GSVIVT01012022001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
GSVIVT01026703001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder output from all 47 species
GSVIVT01027769001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Gb_08038 No alias RING-H2-class E3 ligase 0.01 OrthoFinder output from all 47 species
Gb_29602 BRH1 RHA2 signal transducer of abscisic acid perception 0.01 OrthoFinder output from all 47 species
Gb_36232 No alias IDF1 iron uptake IRT1-ubiquitin ligase 0.01 OrthoFinder output from all 47 species
Gb_40644 BRH1 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
LOC_Os05g29676.1 LOC_Os05g29676 RING-H2-class E3 ligase 0.01 OrthoFinder output from all 47 species
Len_g29871 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Lfl_g33308 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
MA_17249g0010 No alias Putative RING-H2 finger protein ATL71 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
MA_77628g0010 ATL2, TL2 RING-H2-class E3 ligase 0.01 OrthoFinder output from all 47 species
MA_85088g0010 No alias RING-H2-class E3 ligase 0.01 OrthoFinder output from all 47 species
Msp_g07983 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g36544 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g12750 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Nbi_g14075 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Ore_g27916 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g01265 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Ppi_g09527 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003077 No alias not classified & original description: CDS=1-870 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008576 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Smo441685 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder output from all 47 species
Solyc01g006910.4.1 Solyc01g006910 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Solyc02g067680.1.1 Solyc02g067680 RING-H2-class E3 ligase 0.01 OrthoFinder output from all 47 species
Solyc04g074820.3.1 Solyc04g074820 RING-H2-class E3 ligase 0.01 OrthoFinder output from all 47 species
Solyc04g082690.1.1 Solyc04g082690 RING-H2-class E3 ligase 0.01 OrthoFinder output from all 47 species
Solyc06g063110.3.1 Solyc06g063110 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Solyc11g005300.2.1 Solyc11g005300 RING-H2-class E3 ligase 0.01 OrthoFinder output from all 47 species
Solyc11g007530.2.1 Solyc11g007530 RING-H2-class E3 ligase 0.01 OrthoFinder output from all 47 species
Solyc12g094690.1.1 Solyc12g094690 RING-H2 finger protein ATL8 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g30280 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Tin_g12610 No alias RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.01 OrthoFinder output from all 47 species
Zm00001e008560_P001 RHA2A, Zm00001e008560 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e023515_P001 Zm00001e023515 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 939 969
No external refs found!