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No description available
Gene families : OG0002025 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002025_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cre13.g580500 | |
| Cluster | HCCA: Cluster_80 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00067p00080250 | NAP4, ATNAP4,... | Uncharacterized protein At1g03900 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| AT3G58600 | No alias | Adaptin ear-binding coat-associated protein 1 NECAP-1 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0662.g081454 | NAP4, ATNAP4 | not classified & original description: CDS=152-1033 | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g03446 | NAP4, ATNAP4 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os10g33630.1 | NAP4, ATNAP4,... | Uncharacterized protein At1g03900 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g17496 | NAP4, ATNAP4 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| MA_6951g0020 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g16724 | NAP4, ATNAP4 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g08449 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g04761 | NAP4, ATNAP4 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g02552 | NAP4, ATNAP4 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006897 | endocytosis | IEA | Interproscan |
| CC | GO:0016020 | membrane | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
| CC | GO:0005681 | spliceosomal complex | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0008380 | RNA splicing | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR012466 | NECAP_PHear | 9 | 154 |
| No external refs found! |