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  5. Cre13.g562850

Cre13.g562850 (PSB29, THF1)


Aliases : PSB29, THF1

Description : Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.Psb29 protein


Gene families : OG0005582 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005582_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre13.g562850
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AT2G20890 PSB29, THF1 photosystem II reaction center PSB29 protein 0.03 OrthoFinder output from all 47 species
Adi_g049478 PSB29, THF1 regulatory protein *(THF1) of thylakoid biogenesis &... 0.03 OrthoFinder output from all 47 species
Aev_g41933 PSB29, THF1 regulatory protein *(THF1) of thylakoid biogenesis &... 0.01 OrthoFinder output from all 47 species
Ala_g10607 PSB29, THF1 regulatory protein *(THF1) of thylakoid biogenesis &... 0.04 OrthoFinder output from all 47 species
Als_g10332 PSB29, THF1 regulatory protein *(THF1) of thylakoid biogenesis &... 0.04 OrthoFinder output from all 47 species
Aob_g08924 PSB29, THF1 regulatory protein *(THF1) of thylakoid biogenesis &... 0.02 OrthoFinder output from all 47 species
Aop_g10796 PSB29, THF1 regulatory protein *(THF1) of thylakoid biogenesis &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene25675.t1 PSB29, THF1,... regulatory protein *(THF1) of thylakoid bioGenesis &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene25676.t1 PSB29, THF1,... regulatory protein *(THF1) of thylakoid bioGenesis &... 0.02 OrthoFinder output from all 47 species
Azfi_s0018.g014961 PSB29, THF1 regulatory protein *(THF1) of thylakoid biogenesis &... 0.03 OrthoFinder output from all 47 species
Cba_g15644 PSB29, THF1 regulatory protein *(THF1) of thylakoid biogenesis &... 0.02 OrthoFinder output from all 47 species
Ceric.09G053600.1 PSB29, THF1,... regulatory protein *(THF1) of thylakoid biogenesis &... 0.02 OrthoFinder output from all 47 species
Ceric.33G011500.1 PSB29, THF1,... regulatory protein *(THF1) of thylakoid biogenesis &... 0.03 OrthoFinder output from all 47 species
Dac_g11041 PSB29, THF1 regulatory protein *(THF1) of thylakoid biogenesis &... 0.02 OrthoFinder output from all 47 species
Dcu_g05354 PSB29, THF1 regulatory protein *(THF1) of thylakoid biogenesis &... 0.07 OrthoFinder output from all 47 species
Dde_g05773 PSB29, THF1 regulatory protein *(THF1) of thylakoid biogenesis &... 0.03 OrthoFinder output from all 47 species
Ehy_g09593 PSB29, THF1 regulatory protein *(THF1) of thylakoid biogenesis &... 0.06 OrthoFinder output from all 47 species
Ehy_g18167 PSB29, THF1 regulatory protein *(THF1) of thylakoid biogenesis &... 0.02 OrthoFinder output from all 47 species
GSVIVT01029990001 PSB29, THF1 Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder output from all 47 species
Len_g11639 PSB29, THF1 regulatory protein *(THF1) of thylakoid biogenesis &... 0.03 OrthoFinder output from all 47 species
Len_g11640 PSB29, THF1 regulatory protein *(THF1) of thylakoid biogenesis &... 0.01 OrthoFinder output from all 47 species
Lfl_g00738 PSB29, THF1 regulatory protein *(THF1) of thylakoid biogenesis &... 0.02 OrthoFinder output from all 47 species
MA_10426766g0010 PSB29, THF1 Psb29 protein involved in PS-II assembly 0.02 OrthoFinder output from all 47 species
Mp5g23000.1 PSB29, THF1 Psb29 protein involved in PS-II assembly 0.01 OrthoFinder output from all 47 species
Ore_g05861 PSB29, THF1 regulatory protein *(THF1) of thylakoid biogenesis &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0242.g026645 PSB29, THF1 regulatory protein *(THF1) of thylakoid biogenesis &... 0.02 OrthoFinder output from all 47 species
Sam_g09897 No alias regulatory protein *(THF1) of thylakoid biogenesis &... 0.03 OrthoFinder output from all 47 species
Sam_g29483 No alias regulatory protein *(THF1) of thylakoid biogenesis &... 0.02 OrthoFinder output from all 47 species
Spa_g08315 PSB29, THF1 regulatory protein *(THF1) of thylakoid biogenesis &... 0.03 OrthoFinder output from all 47 species
Tin_g03106 PSB29, THF1 regulatory protein *(THF1) of thylakoid biogenesis &... 0.02 OrthoFinder output from all 47 species
Zm00001e035236_P001 PSB29, THF1,... Psb29 protein involved in PS-II assembly 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0010207 photosystem II assembly IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0098809 nitrite reductase activity IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR017499 Thf1 44 246
No external refs found!