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Aliases : GDC1
Description : Protein LHCP TRANSLOCATION DEFECT OS=Arabidopsis thaliana
Gene families : OG0006316 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006316_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cre12.g551950 | |
| Cluster | HCCA: Cluster_28 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00062p00076280 | GDC1,... | Protein LHCP TRANSLOCATION DEFECT OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| AT1G50900 | GDC1 | Ankyrin repeat family protein | 0.07 | OrthoFinder output from all 47 species | |
| Adi_g005475 | GDC1 | SRP insertion system TIC-to-SRP handover factor *(LTD) &... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g00708 | GDC1 | SRP insertion system TIC-to-SRP handover factor *(LTD) &... | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g00497 | GDC1 | SRP insertion system TIC-to-SRP handover factor *(LTD) &... | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g15935 | GDC1 | SRP insertion system TIC-to-SRP handover factor *(LTD) &... | 0.07 | OrthoFinder output from all 47 species | |
| Dac_g00424 | GDC1 | SRP insertion system TIC-to-SRP handover factor *(LTD) &... | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g05121 | GDC1 | SRP insertion system TIC-to-SRP handover factor *(LTD) &... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01002001001 | GDC1 | Protein LHCP TRANSLOCATION DEFECT OS=Arabidopsis thaliana | 0.08 | OrthoFinder output from all 47 species | |
| Gb_05108 | GDC1 | SRP insertion system TIC-to-SRP handover factor (LTD) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os07g33660.1 | GDC1, LOC_Os07g33660 | SRP insertion system TIC-to-SRP handover factor (LTD) | 0.06 | OrthoFinder output from all 47 species | |
| Len_g02031 | GDC1 | SRP insertion system TIC-to-SRP handover factor *(LTD) &... | 0.09 | OrthoFinder output from all 47 species | |
| Lfl_g00282 | GDC1 | SRP insertion system TIC-to-SRP handover factor *(LTD) &... | 0.02 | OrthoFinder output from all 47 species | |
| MA_450177g0010 | GDC1 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Mp3g06400.1 | GDC1 | SRP insertion system TIC-to-SRP handover factor (LTD) | 0.09 | OrthoFinder output from all 47 species | |
| Msp_g05859 | GDC1 | SRP insertion system TIC-to-SRP handover factor *(LTD) &... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g01699 | GDC1 | SRP insertion system TIC-to-SRP handover factor *(LTD) &... | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g00819 | GDC1 | SRP insertion system TIC-to-SRP handover factor *(LTD) &... | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g26583 | GDC1 | SRP insertion system TIC-to-SRP handover factor *(LTD) &... | 0.07 | OrthoFinder output from all 47 species | |
| Pp3c5_16520V3.1 | GDC1, Pp3c5_16520 | Ankyrin repeat family protein | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g04901 | GDC1 | SRP insertion system TIC-to-SRP handover factor *(LTD) &... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0006.g002932 | GDC1 | SRP insertion system TIC-to-SRP handover factor *(LTD) &... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g23702 | No alias | SRP insertion system TIC-to-SRP handover factor *(LTD) &... | 0.05 | OrthoFinder output from all 47 species | |
| Smo228083 | GDC1 | Protein LHCP TRANSLOCATION DEFECT OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g51015 | GDC1 | SRP insertion system TIC-to-SRP handover factor *(LTD) &... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e035117_P001 | GDC1, Zm00001e035117 | SRP insertion system TIC-to-SRP handover factor (LTD) | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000049 | tRNA binding | IEP | HCCA |
| MF | GO:0008483 | transaminase activity | IEP | HCCA |
| MF | GO:0009055 | electron transfer activity | IEP | HCCA |
| MF | GO:0016769 | transferase activity, transferring nitrogenous groups | IEP | HCCA |
| MF | GO:0019842 | vitamin binding | IEP | HCCA |
| MF | GO:0030170 | pyridoxal phosphate binding | IEP | HCCA |
| MF | GO:0070279 | vitamin B6 binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |