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  5. Cre12.g533250

Cre12.g533250 (UBP2, ATUBP2)


Aliases : UBP2, ATUBP2

No description available


Gene families : OG0003367 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003367_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre12.g533250
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
Adi_g017352 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g02672 UBP2, ATUBP2 deubiquitinase *(UBP1-2) & original description: none 0.01 OrthoFinder output from all 47 species
Als_g20619 UBP2, ATUBP2 deubiquitinase *(UBP1-2) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27013 UBP2, ATUBP2 deubiquitinase *(UBP1-2) & original description: none 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000403.102 UBP8 Protein degradation.peptidase families.cysteine-type... 0.01 OrthoFinder output from all 47 species
Dcu_g41440 UBP2, ATUBP2 deubiquitinase *(UBP1-2) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01021053001 UBP2, ATUBP2 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Len_g12921 UBP2, ATUBP2 deubiquitinase *(UBP1-2) & original description: none 0.01 OrthoFinder output from all 47 species
MA_42270g0020 ATUBP1, UBP1 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_609805g0010 UBP2, ATUBP2 deubiquitinase (UBP1-2) 0.02 OrthoFinder output from all 47 species
Mp7g16560.1 UBP2, ATUBP2 deubiquitinase (UBP1-2) 0.03 OrthoFinder output from all 47 species
Msp_g20778 UBP2, ATUBP2 deubiquitinase *(UBP1-2) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g13491 UBP2, ATUBP2 deubiquitinase *(UBP1-2) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0016579 protein deubiquitination IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006904 vesicle docking involved in exocytosis IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
BP GO:0051640 organelle localization IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140029 exocytic process IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA
InterPro domains Description Start Stop
IPR001394 Peptidase_C19_UCH 51 173
IPR001394 Peptidase_C19_UCH 1844 2152
No external refs found!