Cre12.g516500 (ATCUL4, CUL4)

Aliases : ATCUL4, CUL4

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.CUL4-DDB1 ubiquitination complexes.CUL4 scaffold component

Gene families : OG0000920 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000920_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre12.g516500

Target	Alias	Description	ECC score	Gene Family Method
Aev_g15218	ATCUL4, CUL4	scaffold component *(CUL4) of CUL4-DDB1 ubiquitination...	0.01	OrthoFinder output from all 47 species
Ala_g06366	ATCUL3A, ATCUL3,...	scaffold component *(CUL3) of CUL3-BTB E3 ligase...	0.01	OrthoFinder output from all 47 species
Cba_g14747	ATCUL4, CUL4	scaffold component *(CUL4) of CUL4-DDB1 ubiquitination...	0.01	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000157.110	ATCUL4, CUL4	Cullin-4 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Lfl_g02234	ATCUL4, CUL4	scaffold component *(CUL4) of CUL4-DDB1 ubiquitination...	0.01	OrthoFinder output from all 47 species
MA_36374g0010	ATCUL4, CUL4	Cullin-4 OS=Arabidopsis thaliana (sp\|q8lgh4\|cul4_arath : 352.0)	0.02	OrthoFinder output from all 47 species
Mp4g12190.1	ATCUL3A, ATCUL3,...	scaffold component CUL3 of CUL3-BTB E3 ligase complexes	0.03	OrthoFinder output from all 47 species
Smo98006	ATCUL3A, ATCUL3,...	Protein degradation.peptide tagging.Ubiquitin...	0.02	OrthoFinder output from all 47 species
Tin_g01191	ATCUL4, CUL4	scaffold component *(CUL4) of CUL4-DDB1 ubiquiTination...	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019899	enzyme binding	None	Extended
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
MF	GO:0031625	ubiquitin protein ligase binding	IEA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
MF	GO:0044389	ubiquitin-like protein ligase binding	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000145	exocyst	IEP	HCCA
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0004386	helicase activity	IEP	HCCA
MF	GO:0004402	histone acetyltransferase activity	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	HCCA
CC	GO:0005737	cytoplasm	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006473	protein acetylation	IEP	HCCA
BP	GO:0006475	internal protein amino acid acetylation	IEP	HCCA
BP	GO:0006887	exocytosis	IEP	HCCA
MF	GO:0008080	N-acetyltransferase activity	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
MF	GO:0016407	acetyltransferase activity	IEP	HCCA
MF	GO:0016410	N-acyltransferase activity	IEP	HCCA
BP	GO:0016567	protein ubiquitination	IEP	HCCA
BP	GO:0016570	histone modification	IEP	HCCA
BP	GO:0016573	histone acetylation	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
BP	GO:0018193	peptidyl-amino acid modification	IEP	HCCA
BP	GO:0018205	peptidyl-lysine modification	IEP	HCCA
BP	GO:0018393	internal peptidyl-lysine acetylation	IEP	HCCA
BP	GO:0018394	peptidyl-lysine acetylation	IEP	HCCA
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	HCCA
BP	GO:0032446	protein modification by small protein conjugation	IEP	HCCA
BP	GO:0032940	secretion by cell	IEP	HCCA
MF	GO:0034212	peptide N-acetyltransferase activity	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0043543	protein acylation	IEP	HCCA
BP	GO:0046903	secretion	IEP	HCCA
MF	GO:0051539	4 iron, 4 sulfur cluster binding	IEP	HCCA
MF	GO:0061733	peptide-lysine-N-acetyltransferase activity	IEP	HCCA
CC	GO:0099023	vesicle tethering complex	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
BP	GO:0140352	export from cell	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001373	Cullin_N	50	667
IPR019559	Cullin_neddylation_domain	698	758

External Links

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Cre12.g516500 (ATCUL4, CUL4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation