No description available
Gene families : OG0005799 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005799_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Cre12.g508200 | |
Cluster | HCCA: Cluster_53 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT5G08420 | No alias | RNA-binding KH domain-containing protein | 0.05 | OrthoFinder output from all 47 species | |
Adi_g016752 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Als_g53679 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aob_g04898 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0028.g024015 | No alias | not classified & original description: CDS=163-1335 | 0.03 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00021357.6 | No alias | No description available | 0.04 | OrthoFinder output from all 47 species | |
Dac_g23212 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Dcu_g15147 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
GSVIVT01037891001 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os10g31520.1 | LOC_Os10g31520 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
MA_208864g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
MA_897278g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
Mp1g26330.1 | No alias | no hits & (original description: none) | 0.11 | OrthoFinder output from all 47 species | |
Sam_g14695 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Smo107582 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
Solyc02g069950.3.1 | Solyc02g069950 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
Spa_g10809 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Tin_g03176 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e019991_P001 | Zm00001e019991 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
BP | GO:0006364 | rRNA processing | IEP | HCCA |
BP | GO:0006396 | RNA processing | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | HCCA |
CC | GO:0030684 | preribosome | IEP | HCCA |
CC | GO:0032040 | small-subunit processome | IEP | HCCA |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
BP | GO:0034470 | ncRNA processing | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
BP | GO:0042254 | ribosome biogenesis | IEP | HCCA |
BP | GO:0044085 | cellular component biogenesis | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
MF | GO:0046983 | protein dimerization activity | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
No InterPro domains available for this sequence
No external refs found! |