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Aliases : ATCSTF77, CSTF77
Description : RNA processing.RNA 3-end polyadenylation.Cleavage Stimulatory Factor (CstF) complex.CstF77/Rna14 component
Gene families : OG0004932 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004932_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cre12.g506050 | |
| Cluster | HCCA: Cluster_75 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g057301 | ATCSTF77, CSTF77 | component *(CstF77/Rna14) of Cleavage Stimulatory Factor... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g07450 | ATCSTF77, CSTF77 | component *(CstF77/Rna14) of Cleavage Stimulatory Factor... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0580.g078310 | ATCSTF77, CSTF77 | component *(CstF77/Rna14) of Cleavage Stimulatory Factor... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.11G049100.1 | ATCSTF77,... | component *(CstF77/Rna14) of Cleavage Stimulatory Factor... | 0.02 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020710.68 | ATCSTF77, CSTF77 | RNA processing.RNA 3-end polyadenylation.Cleavage... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g23739 | ATCSTF77, CSTF77 | component *(CstF77/Rna14) of Cleavage Stimulatory Factor... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os12g38380.1 | ATCSTF77,... | component CstF77/Rna14 of Cleavage Stimulatory Factor... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g19970 | ATCSTF77, CSTF77 | component *(CstF77/Rna14) of Cleavage Stimulatory Factor... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g02187 | ATCSTF77, CSTF77 | component *(CstF77/Rna14) of Cleavage Stimulatory Factor... | 0.03 | OrthoFinder output from all 47 species | |
| Mp1g21890.1 | ATCSTF77, CSTF77 | component CstF77/Rna14 of Cleavage Stimulatory Factor... | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g11594 | ATCSTF77, CSTF77 | component *(CstF77/Rna14) of Cleavage Stimulatory Factor... | 0.01 | OrthoFinder output from all 47 species | |
| Ore_g11384 | ATCSTF77, CSTF77 | component *(CstF77/Rna14) of Cleavage Stimulatory Factor... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g08292 | No alias | component *(CstF77/Rna14) of Cleavage Stimulatory Factor... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc10g050540.2.1 | ATCSTF77,... | component CstF77/Rna14 of Cleavage Stimulatory Factor... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005634 | nucleus | IEA | Interproscan |
| BP | GO:0006397 | mRNA processing | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR008847 | Suf | 403 | 545 |
| No external refs found! |