Cre12.g501100

Description : Enzyme classification.EC_2 transferases.EC_2.1 transferase transferring one-carbon group(50.2.1 : 124.4) & Zinc finger CCCH domain-containing protein 24 OS=Arabidopsis thaliana

Gene families : OG0006052 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006052_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre12.g501100
Cluster	HCCA: Cluster_71

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00036p00192600	evm_27.TU.AmTr_v1...	Enzyme classification.EC_2 transferases.EC_2.1...	0.02	OrthoFinder output from all 47 species
AT3G21300	No alias	RNA methyltransferase family protein	0.03	OrthoFinder output from all 47 species
Aev_g01290	No alias	EC_2.1 transferase transferring one-carbon group &...	0.02	OrthoFinder output from all 47 species
Aob_g23724	No alias	EC_2.1 transferase transferring one-carbon group &...	0.01	OrthoFinder output from all 47 species
Aop_g18570	No alias	EC_2.1 transferase transferring one-carbon group &...	0.02	OrthoFinder output from all 47 species
Azfi_s0007.g010857	No alias	EC_2.1 transferase transferring one-carbon group &...	0.02	OrthoFinder output from all 47 species
Dcu_g32958	No alias	EC_2.1 transferase transferring one-carbon group &...	0.03	OrthoFinder output from all 47 species
Gb_30651	No alias	Enzyme classification.EC_2 transferases.EC_2.1...	0.01	OrthoFinder output from all 47 species
LOC_Os01g09750.2	LOC_Os01g09750	Enzyme classification.EC_2 transferases.EC_2.1...	0.01	OrthoFinder output from all 47 species
Len_g13271	No alias	EC_2.1 transferase transferring one-carbon group &...	0.02	OrthoFinder output from all 47 species
Lfl_g12637	No alias	EC_2.1 transferase transferring one-carbon group &...	0.01	OrthoFinder output from all 47 species
Msp_g09696	No alias	EC_2.1 transferase transferring one-carbon group &...	0.02	OrthoFinder output from all 47 species
Ore_g02221	No alias	EC_2.1 transferase transferring one-carbon group &...	0.02	OrthoFinder output from all 47 species
Ore_g03436	No alias	EC_2.1 transferase transferring one-carbon group &...	0.02	OrthoFinder output from all 47 species
Pir_g11734	No alias	EC_2.1 transferase transferring one-carbon group &...	0.01	OrthoFinder output from all 47 species
Ppi_g10394	No alias	EC_2.1 transferase transferring one-carbon group &...	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006907	No alias	EC_2.1 transferase transferring one-carbon group &...	0.02	OrthoFinder output from all 47 species
Sam_g51619	No alias	EC_2.1 transferase transferring one-carbon group &...	0.01	OrthoFinder output from all 47 species
Smo170457	No alias	Enzyme classification.EC_2 transferases.EC_2.1...	0.02	OrthoFinder output from all 47 species
Tin_g10401	No alias	EC_2.1 transferase transferring one-carbon group &...	0.02	OrthoFinder output from all 47 species
Zm00001e016567_P003	Zm00001e016567	Enzyme classification.EC_2 transferases.EC_2.1...	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008168	methyltransferase activity	None	Extended
MF	GO:0008173	RNA methyltransferase activity	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016741	transferase activity, transferring one-carbon groups	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005515	protein binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR010280	U5_MeTrfase_fam	508	602
IPR010280	U5_MeTrfase_fam	643	719

External Links

No external refs found!

Cre12.g501100

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation