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  5. Cre12.g492200

Cre12.g492200 (HAT3.1)


Aliases : HAT3.1

Description : RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.PHD transcription factor


Gene families : OG0002217 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002217_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre12.g492200

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00159760 PRHA,... RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
AT4G29940 PRHA pathogenesis related homeodomain protein A 0.02 OrthoFinder output from all 47 species
Aop_g09843 PRHA PHD-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0002.g001568 PRHA PHD-type transcription factor & original description:... 0.01 OrthoFinder output from all 47 species
Dde_g52086 PRHA PHD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01037894001 HAT3.1 RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
Gb_17969 PRHA transcription factor (PHD) 0.01 OrthoFinder output from all 47 species
Gb_21021 HAT3.1 transcription factor (PHD) 0.02 OrthoFinder output from all 47 species
MA_10436527g0010 HAT3.1 transcription factor (PHD) 0.01 OrthoFinder output from all 47 species
Mp4g02060.1 PRHA transcription factor (PHD) 0.02 OrthoFinder output from all 47 species
Nbi_g25164 PRHA PHD-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e019808_P001 HAT3.1, Zm00001e019808 transcription factor (PHD) 0.02 OrthoFinder output from all 47 species
Zm00001e029056_P003 HAT3.1, Zm00001e029056 transcription factor (PHD) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 2045 2099
No external refs found!