Cre12.g484200 (GGPS1)

Aliases : GGPS1

Description : Secondary metabolism.terpenoids.methylerythritol phosphate pathway.geranylgeranyl pyrophosphate synthase

Gene families : OG0001174 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001174_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre12.g484200

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00059p00132310	GGPS1,...	Secondary metabolism.terpenoids.methylerythritol...	0.01	OrthoFinder output from all 47 species
Aev_g04632	GGPS1	EC_2.5 transferase transferring alkyl or aryl group,...	0.03	OrthoFinder output from all 47 species
Ala_g14891	GGPS1	EC_2.5 transferase transferring alkyl or aryl group,...	0.02	OrthoFinder output from all 47 species
Als_g52809	GGPS1	EC_2.5 transferase transferring alkyl or aryl group,...	0.02	OrthoFinder output from all 47 species
Aob_g04946	GGPS1	EC_2.5 transferase transferring alkyl or aryl group,...	0.01	OrthoFinder output from all 47 species
Aob_g08222	GGPS1	EC_2.5 transferase transferring alkyl or aryl group,...	0.06	OrthoFinder output from all 47 species
Aob_g08889	GGPS1	isoprenyl diphosphate synthase *(IDS) & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene22893.t1	GGPS1, Aspi01Gene22893	isoprenyl diphosphate synthase *(IDS) & original...	0.04	OrthoFinder output from all 47 species
Azfi_s0143.g051483	No alias	EC_2.5 transferase transferring alkyl or aryl group,...	0.02	OrthoFinder output from all 47 species
Dcu_g07629	GGPS1	EC_2.5 transferase transferring alkyl or aryl group,...	0.04	OrthoFinder output from all 47 species
Dcu_g09077	GGPS1	isoprenyl diphosphate synthase *(IDS) & original...	0.02	OrthoFinder output from all 47 species
Dcu_g15213	GGPS1	EC_2.5 transferase transferring alkyl or aryl group,...	0.01	OrthoFinder output from all 47 species
Dde_g06835	GGPS1	EC_2.5 transferase transferring alkyl or aryl group,...	0.01	OrthoFinder output from all 47 species
Dde_g44066	GGPS1	EC_2.5 transferase transferring alkyl or aryl group,...	0.01	OrthoFinder output from all 47 species
Gb_08543	GGPS1	catalytic subunit of geranyl diphosphate synthase...	0.02	OrthoFinder output from all 47 species
Len_g00500	GGPS1	EC_2.5 transferase transferring alkyl or aryl group,...	0.01	OrthoFinder output from all 47 species
Len_g07265	GGPS1	EC_2.5 transferase transferring alkyl or aryl group,...	0.01	OrthoFinder output from all 47 species
Lfl_g01814	GGPS1	EC_2.5 transferase transferring alkyl or aryl group,...	0.02	OrthoFinder output from all 47 species
MA_138828g0010	GGPS1	isoprenyl diphosphate synthase	0.01	OrthoFinder output from all 47 species
Mp2g13280.1	GGPS1	isoprenyl diphosphate synthase	0.09	OrthoFinder output from all 47 species
Pir_g10074	GGPS1	EC_2.5 transferase transferring alkyl or aryl group,...	0.04	OrthoFinder output from all 47 species
Pnu_g07785	GGPS1	EC_2.5 transferase transferring alkyl or aryl group,...	0.04	OrthoFinder output from all 47 species
Ppi_g12862	GGPS1	EC_2.5 transferase transferring alkyl or aryl group,...	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007206	No alias	EC_2.5 transferase transferring alkyl or aryl group,...	0.03	OrthoFinder output from all 47 species
Zm00001e010623_P001	GGPS1, Zm00001e010623	isoprenyl diphosphate synthase	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006720	isoprenoid metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008299	isoprenoid biosynthetic process	IEA	Interproscan
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004418	hydroxymethylbilane synthase activity	IEP	HCCA
MF	GO:0004853	uroporphyrinogen decarboxylase activity	IEP	HCCA
BP	GO:0006605	protein targeting	IEP	HCCA
BP	GO:0006612	protein targeting to membrane	IEP	HCCA
BP	GO:0006613	cotranslational protein targeting to membrane	IEP	HCCA
BP	GO:0006614	SRP-dependent cotranslational protein targeting to membrane	IEP	HCCA
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	HCCA
BP	GO:0006779	porphyrin-containing compound biosynthetic process	IEP	HCCA
BP	GO:0008104	protein localization	IEP	HCCA
MF	GO:0008171	O-methyltransferase activity	IEP	HCCA
MF	GO:0008483	transaminase activity	IEP	HCCA
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IEP	HCCA
CC	GO:0009521	photosystem	IEP	HCCA
CC	GO:0009523	photosystem II	IEP	HCCA
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	HCCA
BP	GO:0015031	protein transport	IEP	HCCA
BP	GO:0015979	photosynthesis	IEP	HCCA
BP	GO:0015994	chlorophyll metabolic process	IEP	HCCA
BP	GO:0015995	chlorophyll biosynthetic process	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	HCCA
MF	GO:0016769	transferase activity, transferring nitrogenous groups	IEP	HCCA
MF	GO:0016830	carbon-carbon lyase activity	IEP	HCCA
MF	GO:0016831	carboxy-lyase activity	IEP	HCCA
BP	GO:0018130	heterocycle biosynthetic process	IEP	HCCA
BP	GO:0019438	aromatic compound biosynthetic process	IEP	HCCA
CC	GO:0019898	extrinsic component of membrane	IEP	HCCA
BP	GO:0033013	tetrapyrrole metabolic process	IEP	HCCA
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	HCCA
BP	GO:0033036	macromolecule localization	IEP	HCCA
BP	GO:0033365	protein localization to organelle	IEP	HCCA
BP	GO:0042440	pigment metabolic process	IEP	HCCA
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	HCCA
BP	GO:0045047	protein targeting to ER	IEP	HCCA
BP	GO:0045184	establishment of protein localization	IEP	HCCA
BP	GO:0046148	pigment biosynthetic process	IEP	HCCA
MF	GO:0046406	magnesium protoporphyrin IX methyltransferase activity	IEP	HCCA
BP	GO:0051641	cellular localization	IEP	HCCA
BP	GO:0051668	localization within membrane	IEP	HCCA
MF	GO:0070567	cytidylyltransferase activity	IEP	HCCA
BP	GO:0070727	cellular macromolecule localization	IEP	HCCA
BP	GO:0070972	protein localization to endoplasmic reticulum	IEP	HCCA
BP	GO:0071702	organic substance transport	IEP	HCCA
BP	GO:0071705	nitrogen compound transport	IEP	HCCA
MF	GO:0071949	FAD binding	IEP	HCCA
BP	GO:0072594	establishment of protein localization to organelle	IEP	HCCA
BP	GO:0072599	establishment of protein localization to endoplasmic reticulum	IEP	HCCA
BP	GO:0072657	protein localization to membrane	IEP	HCCA
BP	GO:0090150	establishment of protein localization to membrane	IEP	HCCA
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	HCCA
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	HCCA
CC	GO:1990204	oxidoreductase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000092	Polyprenyl_synt	80	320

External Links

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Cre12.g484200 (GGPS1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation