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  5. Cre11.g476200

Cre11.g476200


No description available


Gene families : OG0000614 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000614_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre11.g476200
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
AT1G32360 No alias Zinc finger (CCCH-type) family protein 0.03 OrthoFinder output from all 47 species
Adi_g018593 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g022217 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g056565 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g059542 No alias regulatory protein of RNA homeostasis & original... 0.01 OrthoFinder output from all 47 species
Ala_g15076 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Als_g07773 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g01754 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Aob_g04427 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Aop_g10028 No alias A1-class (Pepsin) protease & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g14447 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Aop_g20459 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0017.g014471 No alias not classified & original description: CDS=103-1737 0.02 OrthoFinder output from all 47 species
Cba_g17032 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g76784 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.19G050600.1 Ceric.19G050600 not classified & original description: pacid=50576234... 0.04 OrthoFinder output from all 47 species
Ceric.31G012100.1 Ceric.31G012100 regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Ceric.38G012000.1 Ceric.38G012000 not classified & original description: pacid=50579791... 0.06 OrthoFinder output from all 47 species
Dac_g28420 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Dcu_g07039 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g07455 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Dcu_g17295 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Dde_g02169 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Dde_g05290 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01024340001 No alias No description available 0.02 OrthoFinder output from all 47 species
Lfl_g01628 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Lfl_g16999 No alias regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Lfl_g40942 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g10683 No alias A1-class (Pepsin) protease & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g23447 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29816 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30390 No alias regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Ore_g32193 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g38302 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Pir_g05281 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g08578 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g09759 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g12544 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02199 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g05890 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g17330 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000115 No alias platform ATPase CDC48 & original description: CDS=3649-4851 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005344 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Sam_g14380 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g072720.3.1 Solyc06g072720 C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Spa_g21602 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Spa_g28121 No alias A1-class (Pepsin) protease & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g11119 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Tin_g15337 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0031124 mRNA 3'-end processing IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 372 397
IPR000571 Znf_CCCH 306 330
IPR000571 Znf_CCCH 468 493
No external refs found!