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  5. Cre11.g467785

Cre11.g467785 (ATHDA5, HDA05, HDA5)


Aliases : ATHDA5, HDA05, HDA5

Description : Chromatin organisation.histone modifications.histone deacetylation.HD1 histone deacetylase family.class-II histone deacetylase


Gene families : OG0001559 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001559_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre11.g467785
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
Gb_31634 ATHDA15, HDA15 Histone deacetylase 15 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10433858g0010 ATHDA5, HDA05, HDA5 Histone deacetylase 5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0008418 protein-N-terminal asparagine amidohydrolase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR023801 His_deacetylse_dom 10 309
No external refs found!