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  5. Cre10.g452500

Cre10.g452500


No description available


Gene families : OG0005493 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005493_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre10.g452500
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00245500 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT3G01160 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.16 OrthoFinder output from all 47 species
Adi_g054865 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g20730 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g12706 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g52629 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g11485 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene35135.t1 Aspi01Gene35135 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0045.g029829 No alias not classified & original description: CDS=64-2484 0.03 OrthoFinder output from all 47 species
Ceric.24G052900.1 Ceric.24G052900 not classified & original description: pacid=50628958... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001428.2 No alias No description available 0.07 OrthoFinder output from all 47 species
Dac_g16396 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g07705 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g21288 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01007226001 No alias No description available 0.07 OrthoFinder output from all 47 species
LOC_Os07g34740.1 LOC_Os07g34740 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Lfl_g18423 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_35901g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_9632g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp1g25070.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Smo268496 No alias No description available 0.05 OrthoFinder output from all 47 species
Smo268642 No alias No description available 0.04 OrthoFinder output from all 47 species
Solyc02g083470.3.1 Solyc02g083470 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
Spa_g08975 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e035150_P001 Zm00001e035150 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0030490 maturation of SSU-rRNA IEP HCCA
MF GO:0030515 snoRNA binding IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0030688 preribosome, small subunit precursor IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR012580 NUC153 948 974
No external refs found!