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  5. Cre10.g441450

Cre10.g441450


No description available


Gene families : OG0006318 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006318_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre10.g441450
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
Aob_g18001 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.21G041100.1 Ceric.21G041100 not classified & original description: pacid=50602652... 0.04 OrthoFinder output from all 47 species
Dac_g15847 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g01575 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os05g41100.1 LOC_Os05g41100 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Len_g09302 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp5g13090.1 No alias no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
Pir_g30415 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g15524 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo409885 No alias No description available 0.04 OrthoFinder output from all 47 species
Solyc07g064350.3.1 Solyc07g064350 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Tin_g01066 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e013253_P001 Zm00001e013253 no hits & (original description: none) 0.13 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR018034 Kri1 375 459
IPR024626 Kri1-like_C 553 625
No external refs found!