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  5. Cre10.g430950

Cre10.g430950 (ATRAD54, CHR25, RAD54)


Aliases : ATRAD54, CHR25, RAD54

Description : Chromatin organisation.chromatin remodeling complexes.ATPase core components.Rad54-like group.Rad54 chromatin remodeling factor


Gene families : OG0003309 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003309_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre10.g430950
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00126p00116180 ATRAD54, CHR25,... Chromatin organisation.chromatin remodeling... 0.01 OrthoFinder output from all 47 species
Ceric.12G046200.1 ATRAD54, CHR25,... chromatin remodeling factor *(RAD54) & original... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000605.2 ATRAD54, CHR25, RAD54 DNA repair and recombination protein RAD54 OS=Oryza... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020614.39 ATRAD54, CHR25, RAD54 Chromatin organisation.chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Dcu_g39643 ATRAD54, CHR25, RAD54 chromatin remodeling factor *(RAD54) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01031756001 ATRAD54, CHR25, RAD54 Protein CHROMATIN REMODELING 25 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_13099 ATRAD54, CHR25, RAD54 DNA repair and recombination protein RAD54 OS=Oryza... 0.02 OrthoFinder output from all 47 species
Gb_22245 ATRAD54, CHR25, RAD54 DNA repair and recombination protein RAD54 OS=Oryza... 0.05 OrthoFinder output from all 47 species
LOC_Os02g52510.1 ATRAD54, CHR25,... chromatin remodeling factor (Rad54) 0.04 OrthoFinder output from all 47 species
Mp6g06120.1 ATRAD54, CHR25, RAD54 chromatin remodeling factor (Rad54) 0.06 OrthoFinder output from all 47 species
Nbi_g43263 ATRAD54, CHR25, RAD54 chromatin remodeling factor *(RAD54) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0035.g011321 ATRAD54, CHR25, RAD54 not classified & original description: CDS=62-2422 0.01 OrthoFinder output from all 47 species
Solyc04g056410.3.1 ATRAD54, CHR25,... chromatin remodeling factor (Rad54) 0.06 OrthoFinder output from all 47 species
Spa_g37488 ATRAD54, CHR25, RAD54 chromatin remodeling factor *(RAD54) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g45162 ATRAD54, CHR25, RAD54 chromaTin remodeling factor *(RAD54) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004519 endonuclease activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR001650 Helicase_C 712 816
IPR000330 SNF2_N 357 647
No external refs found!