Cre10.g422000

Description : RNA processing.RNA modification.rRNA/tRNA methylation.TRM1 tRNA guanosine-methyltransferase

Gene families : OG0003301 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003301_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre10.g422000

Target	Alias	Description	ECC score	Gene Family Method
AT5G15810	No alias	N2,N2-dimethylguanosine tRNA methyltransferase	0.01	OrthoFinder output from all 47 species
Ala_g25805	No alias	EC_2.1 transferase transferring one-carbon group &...	0.01	OrthoFinder output from all 47 species
Aop_g06933	No alias	EC_2.1 transferase transferring one-carbon group &...	0.01	OrthoFinder output from all 47 species
Aop_g17502	No alias	EC_2.1 transferase transferring one-carbon group &...	0.01	OrthoFinder output from all 47 species
Azfi_s0353.g066641	No alias	EC_2.1 transferase transferring one-carbon group &...	0.05	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021168.21	No alias	RNA processing.RNA modification.rRNA/tRNA...	0.12	OrthoFinder output from all 47 species
Dac_g29342	No alias	EC_2.1 transferase transferring one-carbon group &...	0.02	OrthoFinder output from all 47 species
GSVIVT01036556001	No alias	RNA processing.RNA modification.rRNA/tRNA...	0.05	OrthoFinder output from all 47 species
Gb_38019	No alias	Probable tRNA (guanine(26)-N(2))-dimethyltransferase 1...	0.02	OrthoFinder output from all 47 species
LOC_Os03g57280.1	LOC_Os03g57280	tRNA guanosine-methyltransferase (TRM1)	0.05	OrthoFinder output from all 47 species
Lfl_g03120	No alias	EC_2.1 transferase transferring one-carbon group &...	0.01	OrthoFinder output from all 47 species
Lfl_g07030	No alias	EC_2.1 transferase transferring one-carbon group &...	0.01	OrthoFinder output from all 47 species
MA_10428339g0010	No alias	tRNA guanosine-methyltransferase (TRM1)	0.03	OrthoFinder output from all 47 species
Mp1g00640.1	No alias	tRNA guanosine-methyltransferase (TRM1)	0.09	OrthoFinder output from all 47 species
Sam_g13665	No alias	EC_2.1 transferase transferring one-carbon group &...	0.02	OrthoFinder output from all 47 species
Sam_g30431	No alias	EC_2.1 transferase transferring one-carbon group &...	0.01	OrthoFinder output from all 47 species
Solyc02g089175.2.1	Solyc02g089175	tRNA guanosine-methyltransferase (TRM1)	0.02	OrthoFinder output from all 47 species
Zm00001e001206_P005	Zm00001e001206	tRNA guanosine-methyltransferase (TRM1)	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004809	tRNA (guanine-N2-)-methyltransferase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008033	tRNA processing	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008168	methyltransferase activity	None	Extended
MF	GO:0008170	N-methyltransferase activity	None	Extended
MF	GO:0008173	RNA methyltransferase activity	None	Extended
MF	GO:0008175	tRNA methyltransferase activity	None	Extended
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016423	tRNA (guanine) methyltransferase activity	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016741	transferase activity, transferring one-carbon groups	None	Extended
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140101	catalytic activity, acting on a tRNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000287	magnesium ion binding	IEP	HCCA
BP	GO:0001510	RNA methylation	IEP	HCCA
MF	GO:0004749	ribose phosphate diphosphokinase activity	IEP	HCCA
BP	GO:0006364	rRNA processing	IEP	HCCA
BP	GO:0006400	tRNA modification	IEP	HCCA
BP	GO:0016072	rRNA metabolic process	IEP	HCCA
MF	GO:0016426	tRNA (adenine) methyltransferase activity	IEP	HCCA
MF	GO:0016429	tRNA (adenine-N1-)-methyltransferase activity	IEP	HCCA
MF	GO:0016778	diphosphotransferase activity	IEP	HCCA
BP	GO:0030488	tRNA methylation	IEP	HCCA
CC	GO:0031515	tRNA (m1A) methyltransferase complex	IEP	HCCA
BP	GO:0032259	methylation	IEP	HCCA
CC	GO:0034708	methyltransferase complex	IEP	HCCA
BP	GO:0043414	macromolecule methylation	IEP	HCCA
CC	GO:0043527	tRNA methyltransferase complex	IEP	HCCA
CC	GO:1990234	transferase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002905	Trm1	36	444

External Links

No external refs found!

Cre10.g422000

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation