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  5. Cre09.g400812

Cre09.g400812


No description available


Gene families : OG0003150 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003150_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre09.g400812

Target Alias Description ECC score Gene Family Method Actions
AT1G79830 GC5 golgin candidate 5 0.02 OrthoFinder output from all 47 species
Ala_g08575 GC5 Golgin-type membrane tethering protein *(GC5/TMF) &... 0.01 OrthoFinder output from all 47 species
Als_g09947 GC5 Golgin-type membrane tethering protein *(GC5/TMF) &... 0.01 OrthoFinder output from all 47 species
Aob_g16762 GC5 Golgin-type membrane tethering protein *(GC5/TMF) &... 0.02 OrthoFinder output from all 47 species
Azfi_s0092.g043112 GC5 Golgin-type membrane tethering protein *(GC5/TMF) &... 0.02 OrthoFinder output from all 47 species
Ehy_g07090 GC5 Golgin-type membrane tethering protein *(GC5/TMF) &... 0.02 OrthoFinder output from all 47 species
MA_10244886g0010 GC5 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_9882g0010 GC5 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Mp8g06100.1 GC5 golgin (GC5/TMF) 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001142 GC5 Golgin-type membrane tethering protein *(GC5/TMF) &... 0.01 OrthoFinder output from all 47 species
Solyc06g066610.4.1 GC5, Solyc06g066610 golgin (GC5/TMF) 0.02 OrthoFinder output from all 47 species
Zm00001e026507_P001 GC5, Zm00001e026507 golgin (GC5/TMF) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP HCCA
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007030 Golgi organization IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
CC GO:0030173 obsolete integral component of Golgi membrane IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR022091 TMF_TATA-bd 593 675
No external refs found!