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  5. Cre09.g389541

Cre09.g389541


No description available


Gene families : OG0002819 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002819_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre09.g389541
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
AT2G31890 ATRAP, RAP RAP 0.03 OrthoFinder output from all 47 species
Aop_g08359 ATRAP, RAP 16S-rRNA maturation factor *(RAP) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g14001 ATRAP, RAP 16S-rRNA maturation factor *(RAP) & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01038263001 ATRAP, RAP RAP domain-containing protein, chloroplastic... 0.02 OrthoFinder output from all 47 species
MA_8868156g0010 ATRAP, RAP RAP domain-containing protein, chloroplastic... 0.01 OrthoFinder output from all 47 species
Mp2g23920.1 ATRAP, RAP RAP domain-containing protein, chloroplastic... 0.02 OrthoFinder output from all 47 species
Mp2g23930.1 ATRAP, RAP RAP domain-containing protein, chloroplastic... 0.02 OrthoFinder output from all 47 species
Ore_g28364 ATRAP, RAP 16S-rRNA maturation factor *(RAP) & original description: none 0.02 OrthoFinder output from all 47 species
Smo412574 ATRAP, RAP RAP domain-containing protein, chloroplastic... 0.01 OrthoFinder output from all 47 species
Smo413123 ATRAP, RAP RAP domain-containing protein, chloroplastic OS=Oryza... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP HCCA
BP GO:0002098 tRNA wobble uridine modification IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
CC GO:0033588 elongator holoenzyme complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR013584 RAP 1176 1232
No external refs found!