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  5. Cre09.g388467

Cre09.g388467


Description : Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase membrane association.RAB-GTPase GDP-dissociation inhibitor (RAB-GDI)


Gene families : OG0002116 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002116_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre09.g388467

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00096020 GDI2, ATGDI2,... Vesicle trafficking.regulation of membrane tethering and... 0.05 OrthoFinder output from all 47 species
Adi_g020742 ATGDI1, AT-GDI1, GDI1 RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &... 0.02 OrthoFinder output from all 47 species
Ala_g14896 ATGDI1, AT-GDI1, GDI1 RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &... 0.02 OrthoFinder output from all 47 species
Azfi_s0009.g011870 ATGDI1, AT-GDI1, GDI1 RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &... 0.02 OrthoFinder output from all 47 species
Cba_g12738 GDI2, ATGDI2 RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &... 0.03 OrthoFinder output from all 47 species
Ceric.05G086400.1 Ceric.05G086400 RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &... 0.02 OrthoFinder output from all 47 species
Ceric.12G005600.1 ATGDI1, AT-GDI1,... RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &... 0.04 OrthoFinder output from all 47 species
Dac_g01562 ATGDI1, AT-GDI1, GDI1 RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &... 0.03 OrthoFinder output from all 47 species
Dcu_g06290 ATGDI1, AT-GDI1, GDI1 RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &... 0.03 OrthoFinder output from all 47 species
Ehy_g03780 ATGDI1, AT-GDI1, GDI1 RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &... 0.02 OrthoFinder output from all 47 species
LOC_Os03g16900.1 LOC_Os03g16900 RAB-GTPase GDP-dissociation inhibitor (RAB-GDI) 0.02 OrthoFinder output from all 47 species
Lfl_g06971 ATGDI1, AT-GDI1, GDI1 RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &... 0.03 OrthoFinder output from all 47 species
Nbi_g21880 ATGDI1, AT-GDI1, GDI1 RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &... 0.02 OrthoFinder output from all 47 species
Pir_g02243 ATGDI1, AT-GDI1, GDI1 RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &... 0.02 OrthoFinder output from all 47 species
Pir_g42257 ATGDI1, AT-GDI1, GDI1 RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g002983 ATGDI1, AT-GDI1, GDI1 RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &... 0.02 OrthoFinder output from all 47 species
Smo271917 ATGDI1, AT-GDI1, GDI1 Vesicle trafficking.regulation of membrane tethering and... 0.04 OrthoFinder output from all 47 species
Solyc01g105810.4.1 Solyc01g105810 RAB-GTPase GDP-dissociation inhibitor (RAB-GDI) 0.02 OrthoFinder output from all 47 species
Solyc08g015860.3.1 GDI2, ATGDI2,... RAB-GTPase GDP-dissociation inhibitor (RAB-GDI) 0.06 OrthoFinder output from all 47 species
Zm00001e027047_P001 GDI2, ATGDI2,... RAB-GTPase GDP-dissociation inhibitor (RAB-GDI) 0.02 OrthoFinder output from all 47 species
Zm00001e027048_P001 GDI2, ATGDI2,... accessory subunit of RAB-GTPase... 0.01 OrthoFinder output from all 47 species
Zm00001e031685_P005 ATGDI1, AT-GDI1,... RAB-GTPase GDP-dissociation inhibitor (RAB-GDI) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005092 GDP-dissociation inhibitor activity IEA Interproscan
BP GO:0007264 small GTPase mediated signal transduction IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004134 4-alpha-glucanotransferase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
InterPro domains Description Start Stop
IPR018203 GDP_dissociation_inhibitor 1 435
No external refs found!