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Aliases : NRS/ER, UER1
Description : Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-L-rhamnose synthesis.UDP-L-rhamnose synthase
Gene families : OG0000903 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000903_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00069p00173700 | NRS/ER, UER1,... | Carbohydrate metabolism.nucleotide sugar... | 0.05 | OrthoFinder output from all 47 species | |
| AT1G53500 | ATRHM2, RHM2,... | NAD-dependent epimerase/dehydratase family protein | 0.02 | OrthoFinder output from all 47 species | |
| AT1G63000 | NRS/ER, UER1 | nucleotide-rhamnose synthase/epimerase-reductase | 0.02 | OrthoFinder output from all 47 species | |
| AT3G14790 | ATRHM3, RHM3 | rhamnose biosynthesis 3 | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g010835 | RHM1, ROL1, ATRHM1 | UDP-L-rhamnose synthase *(RHM) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g108283 | NRS/ER, UER1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g13357 | RHM1, ROL1, ATRHM1 | UDP-L-rhamnose synthase *(RHM) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Als_g02950 | NRS/ER, UER1 | dTDP-rhamnose synthase *(NRS-ER) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene18471.t1 | RHM1, ROL1,... | UDP-L-rhamnose synthase *(RHM) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0001.g000482 | NRS/ER, UER1 | dTDP-rhamnose synthase *(NRS-ER) & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g13825 | RHM1, ROL1, ATRHM1 | UDP-L-rhamnose synthase *(RHM) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g04561 | NRS/ER, UER1 | dTDP-rhamnose synthase *(NRS-ER) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g16757 | RHM1, ROL1, ATRHM1 | UDP-L-rhamnose synthase *(RHM) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g08847 | RHM1, ROL1, ATRHM1 | UDP-L-rhamnose synthase *(RHM) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g17000.2 | RHM1, ROL1,... | UDP-L-rhamnose synthase | 0.03 | OrthoFinder output from all 47 species | |
| Mp1g04880.1 | NRS/ER, UER1 | UDP-L-rhamnose synthase | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g09587 | RHM1, ROL1, ATRHM1 | UDP-L-rhamnose synthase *(RHM) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Nbi_g05698 | NRS/ER, UER1 | dTDP-rhamnose synthase *(NRS-ER) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g12352 | RHM1, ROL1, ATRHM1 | UDP-L-rhamnose synthase *(RHM) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g09373 | NRS/ER, UER1 | dTDP-rhamnose synthase *(NRS-ER) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c6_15300V3.1 | NRS/ER, UER1, Pp3c6_15300 | nucleotide-rhamnose synthase/epimerase-reductase | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g10663 | NRS/ER, UER1 | dTDP-rhamnose synthase *(NRS-ER) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g13458 | No alias | UDP-L-rhamnose synthase *(RHM) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g50767 | No alias | UDP-L-rhamnose synthase *(RHM) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc10g007480.4.1 | RHM1, ROL1,... | UDP-L-rhamnose synthase | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e015435_P001 | NRS/ER, UER1,... | UDP-L-rhamnose synthase | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e038472_P001 | RHM1, ROL1,... | UDP-L-rhamnose synthase | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004615 | phosphomannomutase activity | IEP | HCCA |
| CC | GO:0005737 | cytoplasm | IEP | HCCA |
| BP | GO:0006890 | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0009225 | nucleotide-sugar metabolic process | IEP | HCCA |
| BP | GO:0009226 | nucleotide-sugar biosynthetic process | IEP | HCCA |
| BP | GO:0009298 | GDP-mannose biosynthetic process | IEP | HCCA |
| BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| MF | GO:0016853 | isomerase activity | IEP | HCCA |
| MF | GO:0016866 | intramolecular transferase activity | IEP | HCCA |
| MF | GO:0016868 | intramolecular transferase activity, phosphotransferases | IEP | HCCA |
| BP | GO:0019673 | GDP-mannose metabolic process | IEP | HCCA |
| BP | GO:0019725 | cellular homeostasis | IEP | HCCA |
| BP | GO:0042592 | homeostatic process | IEP | HCCA |
| BP | GO:0045454 | cell redox homeostasis | IEP | HCCA |
| BP | GO:0048193 | Golgi vesicle transport | IEP | HCCA |
| MF | GO:0070569 | uridylyltransferase activity | IEP | HCCA |
| BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | HCCA |
| BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR029903 | RmlD-like-bd | 15 | 185 |
| No external refs found! |