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  5. Cre08.g379650

Cre08.g379650 (TIC20)


Aliases : TIC20

Description : Protein translocation.chloroplast.inner envelope TIC translocation system.TIC-20 complex.Tic20-I/IV component


Gene families : OG0005319 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005319_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre08.g379650
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00238260 evm_27.TU.AmTr_v1... Protein translocation.chloroplast.inner envelope TIC... 0.02 OrthoFinder output from all 47 species
AT1G04940 TIC20 translocon at the inner envelope membrane of chloroplasts 20 0.02 OrthoFinder output from all 47 species
Als_g04203 TIC20 component *(Tic20-I/IV) of inner envelope TIC-20 complex... 0.01 OrthoFinder output from all 47 species
Azfi_s0211.g058124 TIC20 component *(Tic20-I/IV) of inner envelope TIC-20 complex... 0.01 OrthoFinder output from all 47 species
Dde_g02006 TIC20 component *(Tic20-I/IV) of inner envelope TIC-20 complex... 0.01 OrthoFinder output from all 47 species
GSVIVT01009769001 TIC20 Protein translocation.chloroplast.inner envelope TIC... 0.03 OrthoFinder output from all 47 species
LOC_Os07g38110.1 LOC_Os07g38110 component Tic20-I/IV of inner envelope TIC-20 complex 0.03 OrthoFinder output from all 47 species
Len_g09873 TIC20 component *(Tic20-I/IV) of inner envelope TIC-20 complex... 0.02 OrthoFinder output from all 47 species
Mp3g05820.1 TIC20 component Tic20-I/IV of inner envelope TIC-20 complex 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0038.g012041 TIC20 component *(Tic20-I/IV) of inner envelope TIC-20 complex... 0.02 OrthoFinder output from all 47 species
Smo98520 TIC20 Protein translocation.chloroplast.inner envelope TIC... 0.02 OrthoFinder output from all 47 species
Solyc05g054720.3.1 TIC20, Solyc05g054720 component Tic20-I/IV of inner envelope TIC-20 complex 0.02 OrthoFinder output from all 47 species
Spa_g06282 TIC20 component *(Tic20-I/IV) of inner envelope TIC-20 complex... 0.02 OrthoFinder output from all 47 species
Spa_g06283 TIC20 component *(Tic20-I/IV) of inner envelope TIC-20 complex... 0.02 OrthoFinder output from all 47 species
Spa_g29705 TIC20 component *(Tic20-I/IV) of inner envelope TIC-20 complex... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
BP GO:0000105 histidine biosynthetic process IEP HCCA
MF GO:0004107 chorismate synthase activity IEP HCCA
MF GO:0004635 phosphoribosyl-AMP cyclohydrolase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006474 N-terminal protein amino acid acetylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006547 histidine metabolic process IEP HCCA
MF GO:0008565 obsolete protein transporter activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0017196 N-terminal peptidyl-methionine acetylation IEP HCCA
BP GO:0018206 peptidyl-methionine modification IEP HCCA
MF GO:0019238 cyclohydrolase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0031248 protein acetyltransferase complex IEP HCCA
BP GO:0031365 N-terminal protein amino acid modification IEP HCCA
CC GO:0031414 N-terminal protein acetyltransferase complex IEP HCCA
CC GO:0031417 NatC complex IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
MF GO:0070569 uridylyltransferase activity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1902493 acetyltransferase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR005691 Tic20 88 245
No external refs found!