1. Home
  2. Species
  3. Chlamydomonas reinhardtii
  4. Sequence
  5. Cre08.g378850

Cre08.g378850


Description : Ribose-phosphate pyrophosphokinase 1 OS=Spinacia oleracea


Gene families : OG0002449 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002449_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre08.g378850

Target Alias Description ECC score Gene Family Method Actions
AT2G35390 No alias Phosphoribosyltransferase family protein 0.01 OrthoFinder output from all 47 species
Adi_g007162 No alias EC_2.7 transferase transferring phosphorus-containing... 0.01 OrthoFinder output from all 47 species
Ala_g11759 No alias EC_2.7 transferase transferring phosphorus-containing... 0.01 OrthoFinder output from all 47 species
Aop_g04451 No alias EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Azfi_s0185.g056615 No alias EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000140.20 No alias Enzyme classification.EC_2 transferases.EC_2.7... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000792.66 No alias Enzyme classification.EC_2 transferases.EC_2.7... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021537.15 No alias Ribose-phosphate pyrophosphokinase 1 OS=Spinacia oleracea 0.03 OrthoFinder output from all 47 species
Msp_g05367 No alias EC_2.7 transferase transferring phosphorus-containing... 0.01 OrthoFinder output from all 47 species
Spa_g09858 No alias EC_2.7 transferase transferring phosphorus-containing... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA Interproscan
MF GO:0004749 ribose phosphate diphosphokinase activity IEA Interproscan
BP GO:0009165 nucleotide biosynthetic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008175 tRNA methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR005946 Rib-P_diPkinase 307 413
IPR029099 Pribosyltran_N 106 222
No external refs found!