Aliases : GATA1
Description : RNA biosynthesis.transcriptional activation.C2C2 superfamily.GATA transcription factor
Gene families : OG0000100 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000100_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00057p00121410 | GATA15,... | RNA biosynthesis.transcriptional activation.C2C2... | 0.02 | OrthoFinder output from all 47 species | |
Adi_g086607 | GATA12 | transcription factor *(A/B-GATA) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Aop_g04324 | GNC, GATA21 | transcription factor *(A/B-GATA) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Aop_g21776 | GNC, GATA21 | transcription factor *(A/B-GATA) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Cba_g36695 | GATA15 | transcription factor *(A/B-GATA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g14273 | GATA4 | transcription factor *(A/B-GATA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os05g44400.1 | GATA12, LOC_Os05g44400 | transcription factor (GATA) | 0.01 | OrthoFinder output from all 47 species | |
Pir_g06393 | GATA6 | transcription factor *(A/B-GATA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g05839 | GATA5 | transcription factor *(A/B-GATA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Smo69510 | GATA23 | RNA biosynthesis.transcriptional activation.C2C2... | 0.01 | OrthoFinder output from all 47 species | |
Tin_g10967 | GNC, GATA21 | transcription factor *(A/B-GATA) & original description: none | 0.01 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006355 | regulation of DNA-templated transcription | IEA | Interproscan |
MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
MF | GO:0043565 | sequence-specific DNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0030246 | carbohydrate binding | IEP | HCCA |
MF | GO:0030247 | polysaccharide binding | IEP | HCCA |
MF | GO:2001070 | starch binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000679 | Znf_GATA | 229 | 258 |
No external refs found! |