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  5. Cre07.g352800

Cre07.g352800


No description available


Gene families : OG0002159 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002159_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre07.g352800
Cluster HCCA: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00080p00141940 ATRNL, AtRLG1,... tRNA ligase 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Als_g18263 ATRNL, AtRLG1, RNL multifunctional tRNA ligase *(RLG1) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08261 ATRNL, AtRLG1, RNL multifunctional tRNA ligase *(RLG1) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene42899.t1 ATRNL, AtRLG1,... multifunctional tRNA ligase *(RLG1) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene42903.t1 ATRNL, AtRLG1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0072.g036985 ATRNL, AtRLG1, RNL multifunctional tRNA ligase *(RLG1) & original... 0.01 OrthoFinder output from all 47 species
Gb_26327 ATRNL, AtRLG1, RNL tRNA ligase 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10436133g0010 ATRNL, AtRLG1, RNL tRNA ligase 1 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Ore_g12723 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003078 ATRNL, AtRLG1, RNL multifunctional tRNA ligase *(RLG1) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
BP GO:0000105 histidine biosynthetic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004399 histidinol dehydrogenase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006547 histidine metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0008987 quinolinate synthetase A activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009435 NAD biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP HCCA
BP GO:0019362 pyridine nucleotide metabolic process IEP HCCA
BP GO:0019363 pyridine nucleotide biosynthetic process IEP HCCA
BP GO:0019674 NAD metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046496 nicotinamide nucleotide metabolic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0072524 pyridine-containing compound metabolic process IEP HCCA
BP GO:0072525 pyridine-containing compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!