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  5. Cre07.g332800

Cre07.g332800


No description available


Gene families : OG0006078 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006078_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre07.g332800
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AT1G63810 No alias CONTAINS InterPro DOMAIN/s: Nrap protein... 0.08 OrthoFinder output from all 47 species
Aspi01Gene72457.t1 Aspi01Gene72457 pre-40S ribosomal subunit assembly factor *(UTP22) &... 0.02 OrthoFinder output from all 47 species
Ceric.24G063300.1 Ceric.24G063300 pre-40S ribosomal subunit assembly factor *(UTP22) &... 0.03 OrthoFinder output from all 47 species
Dcu_g25897 No alias pre-40S ribosomal subunit assembly factor *(UTP22) &... 0.05 OrthoFinder output from all 47 species
GSVIVT01018952001 No alias No description available 0.07 OrthoFinder output from all 47 species
Gb_07104 No alias pre-40S ribosomal subunit assembly factor (UTP22) 0.02 OrthoFinder output from all 47 species
LOC_Os12g06910.1 LOC_Os12g06910 pre-40S ribosomal subunit assembly factor (UTP22) 0.08 OrthoFinder output from all 47 species
Lfl_g02369 No alias pre-40S ribosomal subunit assembly factor *(UTP22) &... 0.03 OrthoFinder output from all 47 species
MA_10427874g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp6g08990.1 No alias pre-40S ribosomal subunit assembly factor (UTP22) 0.11 OrthoFinder output from all 47 species
Nbi_g13700 No alias pre-40S ribosomal subunit assembly factor *(UTP22) &... 0.01 OrthoFinder output from all 47 species
Ore_g26767 No alias pre-40S ribosomal subunit assembly factor *(UTP22) &... 0.02 OrthoFinder output from all 47 species
Pir_g16349 No alias pre-40S ribosomal subunit assembly factor *(UTP22) &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0180.g024789 No alias pre-40S ribosomal subunit assembly factor *(UTP22) &... 0.02 OrthoFinder output from all 47 species
Sam_g08101 No alias pre-40S ribosomal subunit assembly factor *(UTP22) &... 0.03 OrthoFinder output from all 47 species
Smo407792 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc02g085230.3.1 Solyc02g085230 pre-40S ribosomal subunit assembly factor (UTP22) 0.06 OrthoFinder output from all 47 species
Tin_g02885 No alias pre-40S ribosomal subunit assembly factor *(UTP22) &... 0.04 OrthoFinder output from all 47 species
Zm00001e018445_P001 Zm00001e018445 pre-40S ribosomal subunit assembly factor (UTP22) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR035368 Nrap_D3 625 773
IPR035371 Nrap_D6 1345 1450
IPR035369 Nrap_D4 804 956
IPR035082 Nrap_D1 213 371
IPR035367 Nrap_D2 382 570
IPR035370 Nrap_D5 1027 1166
No external refs found!