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  5. Cre06.g310750

Cre06.g310750


Description : Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.cargo adaptor F-subcomplex.gamma subunit


Gene families : OG0004080 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004080_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre06.g310750
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00069290 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein I (COPI) coatomer... 0.05 OrthoFinder output from all 47 species
AT4G34450 No alias coatomer gamma-2 subunit, putative / gamma-2 coat... 0.11 OrthoFinder output from all 47 species
Adi_g106385 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.01 OrthoFinder output from all 47 species
Aev_g14556 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 47 species
Aev_g44391 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Ala_g05681 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Als_g23314 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.05 OrthoFinder output from all 47 species
Aob_g15373 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.01 OrthoFinder output from all 47 species
Aop_g06505 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Cba_g22384 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Ceric.04G110200.1 Ceric.04G110200 subunit gamma of cargo adaptor F-subcomplex & original... 0.05 OrthoFinder output from all 47 species
Ceric.28G060100.1 Ceric.28G060100 subunit gamma of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020629.20 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.04 OrthoFinder output from all 47 species
Dac_g03838 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Dcu_g01867 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.06 OrthoFinder output from all 47 species
Dde_g05374 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.05 OrthoFinder output from all 47 species
Ehy_g21784 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.01 OrthoFinder output from all 47 species
Ehy_g29298 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01031955001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.07 OrthoFinder output from all 47 species
Gb_36850 No alias subunit gamma of cargo adaptor F-subcomplex 0.07 OrthoFinder output from all 47 species
Gb_36851 No alias Coatomer subunit gamma-2 OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
LOC_Os03g12590.1 LOC_Os03g12590 subunit gamma of cargo adaptor F-subcomplex 0.05 OrthoFinder output from all 47 species
LOC_Os07g10150.1 LOC_Os07g10150 subunit gamma of cargo adaptor F-subcomplex 0.06 OrthoFinder output from all 47 species
Len_g13320 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Lfl_g02207 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 47 species
Mp1g05250.1 No alias subunit gamma of cargo adaptor F-subcomplex 0.08 OrthoFinder output from all 47 species
Msp_g24101 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.06 OrthoFinder output from all 47 species
Nbi_g10516 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.06 OrthoFinder output from all 47 species
Ore_g06577 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Pir_g10430 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.05 OrthoFinder output from all 47 species
Pnu_g08933 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.01 OrthoFinder output from all 47 species
Ppi_g01355 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 47 species
Sam_g09045 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 47 species
Smo268757 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.04 OrthoFinder output from all 47 species
Solyc01g109540.4.1 Solyc01g109540 subunit gamma of cargo adaptor F-subcomplex 0.08 OrthoFinder output from all 47 species
Spa_g17860 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.06 OrthoFinder output from all 47 species
Tin_g11774 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Zm00001e000949_P001 Zm00001e000949 subunit gamma of cargo adaptor F-subcomplex 0.06 OrthoFinder output from all 47 species
Zm00001e011398_P002 Zm00001e011398 subunit gamma of cargo adaptor F-subcomplex 0.09 OrthoFinder output from all 47 species
Zm00001e033065_P001 Zm00001e033065 subunit gamma of cargo adaptor F-subcomplex 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEA Interproscan
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
CC GO:0030126 COPI vesicle coat IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005048 signal sequence binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006621 protein retention in ER lumen IEP HCCA
BP GO:0006855 xenobiotic transmembrane transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
BP GO:0032507 maintenance of protein location in cell IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
BP GO:0042908 xenobiotic transport IEP HCCA
BP GO:0045185 maintenance of protein location IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
MF GO:0046923 ER retention sequence binding IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0051651 maintenance of location in cell IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0072595 maintenance of protein localization in organelle IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR002553 Clathrin/coatomer_adapt-like_N 39 548
IPR013040 Coatomer_gsu_app_Ig-like_dom 634 779
IPR032154 Coatomer_g_Cpla 782 896
No external refs found!