Cre06.g310000

Description : Vesicle trafficking.endomembrane trafficking.vacuolar sorting.AP-4 vacuole cargo adaptor complex.AP4E large epsilon subunit

Gene families : OG0004559 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004559_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre06.g310000

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00117p00120670	evm_27.TU.AmTr_v1...	Vesicle trafficking.endomembrane trafficking.vacuolar...	0.02	OrthoFinder output from all 47 species
AT1G31730	No alias	Adaptin family protein	0.04	OrthoFinder output from all 47 species
Aev_g02590	No alias	large subunit epsilon of AP-4 vacuole cargo adaptor...	0.03	OrthoFinder output from all 47 species
Ala_g06245	No alias	large subunit epsilon of AP-4 vacuole cargo adaptor...	0.03	OrthoFinder output from all 47 species
Als_g22306	No alias	large subunit epsilon of AP-4 vacuole cargo adaptor...	0.02	OrthoFinder output from all 47 species
Aob_g03588	No alias	large subunit epsilon of AP-4 vacuole cargo adaptor...	0.03	OrthoFinder output from all 47 species
Azfi_s0048.g030676	No alias	large subunit epsilon of AP-4 vacuole cargo adaptor...	0.03	OrthoFinder output from all 47 species
Ceric.09G002800.1	Ceric.09G002800	large subunit epsilon of AP-4 vacuole cargo adaptor...	0.03	OrthoFinder output from all 47 species
Dcu_g01987	No alias	large subunit epsilon of AP-4 vacuole cargo adaptor...	0.04	OrthoFinder output from all 47 species
Dde_g28708	No alias	large subunit epsilon of AP-4 vacuole cargo adaptor...	0.02	OrthoFinder output from all 47 species
Ehy_g19814	No alias	large subunit epsilon of AP-4 vacuole cargo adaptor...	0.01	OrthoFinder output from all 47 species
GSVIVT01036887001	No alias	Vesicle trafficking.endomembrane trafficking.vacuolar...	0.07	OrthoFinder output from all 47 species
LOC_Os01g68750.1	LOC_Os01g68750	large subunit epsilon of AP-4 vacuole cargo adaptor complex	0.05	OrthoFinder output from all 47 species
Lfl_g03471	No alias	large subunit epsilon of AP-4 vacuole cargo adaptor...	0.07	OrthoFinder output from all 47 species
MA_10436474g0010	No alias	large subunit epsilon of AP-4 vacuole cargo adaptor complex	0.04	OrthoFinder output from all 47 species
MA_173844g0010	No alias	AP-4 complex subunit epsilon OS=Arabidopsis thaliana...	0.01	OrthoFinder output from all 47 species
MA_41176g0010	No alias	AP-4 complex subunit epsilon OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Nbi_g01469	No alias	large subunit epsilon of AP-4 vacuole cargo adaptor...	0.03	OrthoFinder output from all 47 species
Pir_g01682	No alias	large subunit epsilon of AP-4 vacuole cargo adaptor...	0.03	OrthoFinder output from all 47 species
Sam_g18644	No alias	large subunit epsilon of AP-4 vacuole cargo adaptor...	0.02	OrthoFinder output from all 47 species
Smo170737	No alias	Vesicle trafficking.endomembrane trafficking.vacuolar...	0.03	OrthoFinder output from all 47 species
Solyc08g075310.4.1	Solyc08g075310	large subunit epsilon of AP-4 vacuole cargo adaptor complex	0.04	OrthoFinder output from all 47 species
Zm00001e018853_P002	Zm00001e018853	large subunit epsilon of AP-4 vacuole cargo adaptor complex	0.06	OrthoFinder output from all 47 species
Zm00001e028486_P002	Zm00001e028486	large subunit epsilon of AP-4 vacuole cargo adaptor complex	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	IEA	Interproscan
CC	GO:0030117	membrane coat	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
BP	GO:0009966	regulation of signal transduction	IEP	HCCA
BP	GO:0010646	regulation of cell communication	IEP	HCCA
BP	GO:0023051	regulation of signaling	IEP	HCCA
BP	GO:0032012	regulation of ARF protein signal transduction	IEP	HCCA
BP	GO:0046578	regulation of Ras protein signal transduction	IEP	HCCA
BP	GO:0048583	regulation of response to stimulus	IEP	HCCA
BP	GO:0051056	regulation of small GTPase mediated signal transduction	IEP	HCCA
BP	GO:1902531	regulation of intracellular signal transduction	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002553	Clathrin/coatomer_adapt-like_N	44	628

External Links

No external refs found!

Cre06.g310000

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation