Cre06.g275500 (RAP2.2)

Aliases : RAP2.2

No description available

Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre06.g275500

Target	Alias	Description	ECC score	Gene Family Method
Adi_g020058	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Ala_g09376	HRE2	subgroup ERF-VI transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Als_g11206	RAP2.2	transcription factor component *(HRE/RAP2.12) of...	0.01	OrthoFinder output from all 47 species
Als_g37382	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene07338.t1	Aspi01Gene07338	subgroup ERF-V transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene09185.t1	RAP2.2, Aspi01Gene09185	transcription factor component *(HRE/RAP2.12) of...	0.05	OrthoFinder output from all 47 species
Aspi01Gene17529.t1	RAP2.11, Aspi01Gene17529	transcription factor *(ERN1) & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene23658.t1	HRE2, Aspi01Gene23658	transcription factor component *(HRE/RAP2.12) of...	0.02	OrthoFinder output from all 47 species
Aspi01Gene32075.t1	DREB26, Aspi01Gene32075	subgroup ERF-II transcription factor *(ERF16/17/18) &...	0.02	OrthoFinder output from all 47 species
Aspi01Gene52705.t1	DREB26, Aspi01Gene52705	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene53898.t1	Aspi01Gene53898	subgroup ERF-II transcription factor *(ERF16/17/18) &...	0.02	OrthoFinder output from all 47 species
Aspi01Gene53899.t1	Aspi01Gene53899	subgroup ERF-II transcription factor *(ERF16/17/18) &...	0.02	OrthoFinder output from all 47 species
Aspi01Gene56616.t1	DEAR3, Aspi01Gene56616	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene60678.t1	ERF-1, ATERF-1,...	subgroup ERF-IX transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene63647.t1	ERF72, EBP,...	transcription factor component *(HRE/RAP2.12) of...	0.02	OrthoFinder output from all 47 species
Aspi01Gene67784.t1	ERF-1, ATERF-1,...	subgroup ERF-IX transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Azfi_s0011.g012465	RAP2.1	not classified & original description: CDS=1-1059	0.03	OrthoFinder output from all 47 species
Azfi_s0149.g053251	No alias	subgroup ERF-V transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ceric.33G013500.1	CRF3, Ceric.33G013500	subgroup ERF-VI transcription factor & original...	0.02	OrthoFinder output from all 47 species
Dcu_g13593	ATERF12, ERF12	subgroup ERF-VIII transcription factor & original...	0.01	OrthoFinder output from all 47 species
Dde_g02890	No alias	subgroup ERF-IV/DREB2 transcription factor & original...	0.06	OrthoFinder output from all 47 species
Dde_g22618	ERF2, ATERF2, ATERF-2	subgroup ERF-IX transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Gb_00125	TINY2	transcription factor (DREB)	0.03	OrthoFinder output from all 47 species
LOC_Os01g07120.1	DREB2A, DREB2,...	transcription factor (DREB)	0.03	OrthoFinder output from all 47 species
MA_137148g0010	ATERF4, RAP2.5,...	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
MA_27642g0010	PUCHI	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Pir_g01199	ERF7, ATERF7, ATERF-7	subgroup ERF-VIII transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ppi_g28083	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Solyc01g008890.4.1	CRF4, Solyc01g008890	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
Spa_g10938	ATERF12, ERF12	subgroup ERF-VIII transcription factor & original...	0.03	OrthoFinder output from all 47 species
Spa_g42439	RAP2.9, DEAR5	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g49731	ATERF12, ERF12	subgroup ERF-VIII transcription factor & original...	0.02	OrthoFinder output from all 47 species
Tin_g13149	ATERF-9, ERF9, ATERF9	not classified & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	96	144

External Links

No external refs found!

Cre06.g275500 (RAP2.2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation