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  5. Cre06.g250800

Cre06.g250800


No description available


Gene families : OG0001047 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001047_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre06.g250800
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00036p00235910 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00099p00056810 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00169p00047130 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G33680 No alias KH domain-containing protein 0.04 OrthoFinder output from all 47 species
AT2G25970 No alias KH domain-containing protein 0.02 OrthoFinder output from all 47 species
AT4G10070 No alias KH domain-containing protein 0.01 OrthoFinder output from all 47 species
Adi_g013154 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g014211 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g12253 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g02435 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g29246 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g02902 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12066 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020553.157 No alias Protein BTR1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dcu_g11741 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01035354001 No alias No description available 0.01 OrthoFinder output from all 47 species
GSVIVT01036378001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_31122 No alias Protein BTR1 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
LOC_Os02g13130.1 LOC_Os02g13130 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os08g01930.1 LOC_Os08g01930 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g23905 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g24459 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g59778 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g02045 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
MA_13061g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g17013 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g17404 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g49685 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g18992 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19200 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10281 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc11g040370.2.1 Solyc11g040370 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc12g095960.3.1 Solyc12g095960 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Spa_g07318 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g39488 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e014452_P001 Zm00001e014452 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e029163_P001 Zm00001e029163 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 2 62
IPR004088 KH_dom_type_1 82 144
IPR004088 KH_dom_type_1 175 236
IPR001202 WW_dom 368 395
No external refs found!