Cre04.g218700

Description : Protein biosynthesis.organelle translation machineries.translation initiation.IF-1 initiation factor

Gene families : OG0011375 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011375_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre04.g218700

Target	Alias	Description	ECC score	Gene Family Method
AT4G11175	No alias	Nucleic acid-binding, OB-fold-like protein	0.07	OrthoFinder output from all 47 species
LOC_Os04g16834.1	LOC_Os04g16834	IF-1 translation initiation factor	0.02	OrthoFinder output from all 47 species
LOC_Os05g22716.1	LOC_Os05g22716	IF-1 translation initiation factor	0.02	OrthoFinder output from all 47 species
Smo79973	No alias	Protein biosynthesis.organelle translation...	0.04	OrthoFinder output from all 47 species
Solyc12g098350.1.1	Solyc12g098350	IF-1 translation initiation factor	0.09	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0003743	translation initiation factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006413	translational initiation	IEA	Interproscan
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
MF	GO:0045182	translation regulator activity	None	Extended
MF	GO:0090079	translation regulator activity, nucleic acid binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005506	iron ion binding	IEP	HCCA
BP	GO:0006457	protein folding	IEP	HCCA
BP	GO:0006629	lipid metabolic process	IEP	HCCA
BP	GO:0008104	protein localization	IEP	HCCA
BP	GO:0008610	lipid biosynthetic process	IEP	HCCA
BP	GO:0015031	protein transport	IEP	HCCA
BP	GO:0033036	macromolecule localization	IEP	HCCA
BP	GO:0045184	establishment of protein localization	IEP	HCCA
BP	GO:0051641	cellular localization	IEP	HCCA
BP	GO:0070727	cellular macromolecule localization	IEP	HCCA
BP	GO:0071702	organic substance transport	IEP	HCCA
BP	GO:0071705	nitrogen compound transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006196	RNA-binding_domain_S1_IF1	80	140

External Links

No external refs found!