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Description : DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).Smc5-Smc6 complex.NSE4 Kleisin-like bridging component
Gene families : OG0002126 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002126_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cre04.g215650 | |
| Cluster | HCCA: Cluster_72 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Aob_g07887 | No alias | Kleisin-like bridging component *(NSE4) of homologous... | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.01G103900.1 | Ceric.01G103900 | Kleisin-like bridging component *(NSE4) of homologous... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g29520 | No alias | Kleisin-like bridging component *(NSE4) of homologous... | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01025357001 | No alias | DNA damage response.DNA repair mechanisms.homologous... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01033510001 | No alias | DNA damage response.DNA repair mechanisms.homologous... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g10090.1 | LOC_Os02g10090 | Kleisin-like bridging component NSE4 of homologous... | 0.01 | OrthoFinder output from all 47 species | |
| MA_10431826g0010 | No alias | Kleisin-like bridging component NSE4 of homologous... | 0.03 | OrthoFinder output from all 47 species | |
| MA_71922g0010 | No alias | Kleisin-like bridging component NSE4 of homologous... | 0.01 | OrthoFinder output from all 47 species | |
| Mp7g13530.1 | No alias | Kleisin-like bridging component NSE4 of homologous... | 0.01 | OrthoFinder output from all 47 species | |
| Ore_g24189 | No alias | Kleisin-like bridging component *(NSE4) of homologous... | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e030510_P001 | Zm00001e030510 | Kleisin-like bridging component NSE4 of homologous... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003924 | GTPase activity | IEP | HCCA |
| MF | GO:0004190 | aspartic-type endopeptidase activity | IEP | HCCA |
| BP | GO:0006281 | DNA repair | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| MF | GO:0008092 | cytoskeletal protein binding | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| MF | GO:0015631 | tubulin binding | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| BP | GO:0033554 | cellular response to stress | IEP | HCCA |
| MF | GO:0043015 | gamma-tubulin binding | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
| MF | GO:0070001 | aspartic-type peptidase activity | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR014854 | Nse4_C | 216 | 308 |
| No external refs found! |