1. Home
  2. Species
  3. Chlamydomonas reinhardtii
  4. Sequence
  5. Cre04.g213905

Cre04.g213905


No description available


Gene families : OG0001497 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001497_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre04.g213905

Target Alias Description ECC score Gene Family Method Actions
AT2G16940 No alias Splicing factor, CC1-like 0.04 OrthoFinder output from all 47 species
AT5G09880 No alias Splicing factor, CC1-like 0.02 OrthoFinder output from all 47 species
Adi_g117075 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g37808 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g06965 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21138 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21139 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g28379 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g36170 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g60811 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.27G027600.1 Ceric.27G027600 not classified & original description: pacid=50605291... 0.02 OrthoFinder output from all 47 species
Dcu_g20118 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g47761 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01022281001 No alias 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana sylvestris 0.03 OrthoFinder output from all 47 species
Gb_39308 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g58331 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g34973 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp7g19710.1 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Nbi_g07209 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g11719 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g15282 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g60972 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g11287 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g35972 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g07420 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e012773_P005 Zm00001e012773 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e038994_P002 Zm00001e038994 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
CC GO:0005685 U1 snRNP IEP HCCA
BP GO:0006376 mRNA splice site selection IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR029123 RBM39_linker 452 560
IPR000504 RRM_dom 568 618
IPR000504 RRM_dom 269 336
IPR000504 RRM_dom 159 223
No external refs found!