Cre03.g208100

Description : Inactive exonuclease DIS3L2 OS=Arabidopsis thaliana

Gene families : OG0001431 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001431_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre03.g208100
Cluster	HCCA: Cluster_61

Target	Alias	Description	ECC score	Gene Family Method
Azfi_s0003.g007868	No alias	not classified & original description: CDS=58-3765	0.01	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000640.22	EMB2763	Exosome complex exonuclease RRP44 homolog A...	0.01	OrthoFinder output from all 47 species
MA_10433522g0020	EMB2763	Exosome complex exonuclease RRP44 homolog A...	0.01	OrthoFinder output from all 47 species
MA_40294g0010	No alias	DIS3-like exonuclease 2 OS=Arabidopsis thaliana...	0.01	OrthoFinder output from all 47 species
Mp8g05460.1	EMB2763	exoribonuclease (Dis3/RRP44)	0.02	OrthoFinder output from all 47 species
Ppi_g01411	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Sam_g13679	No alias	exoribonuclease *(RRP44a) & original description: none	0.02	OrthoFinder output from all 47 species
Solyc02g082460.3.1	EMB2763, Solyc02g082460	exoribonuclease (Dis3/RRP44)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004518	nuclease activity	None	Extended
MF	GO:0004540	ribonuclease activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004222	metalloendopeptidase activity	IEP	HCCA
MF	GO:0004527	exonuclease activity	IEP	HCCA
MF	GO:0008237	metallopeptidase activity	IEP	HCCA
MF	GO:0008408	3'-5' exonuclease activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001900	RNase_II/R	800	863
IPR033771	Rrp44_CSD1	167	240
IPR001900	RNase_II/R	478	753

External Links

No external refs found!