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  5. Cre03.g197000

Cre03.g197000


Description : Ribosome production factor 2 homolog OS=Arabidopsis thaliana


Gene families : OG0006885 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006885_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre03.g197000
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AT3G23620 No alias Ribosomal RNA processing Brix domain protein 0.13 OrthoFinder output from all 47 species
Aev_g03783 No alias component *(ARPF2) of ARPF2-ARRS1 complex & original... 0.01 OrthoFinder output from all 47 species
Aop_g12213 No alias component *(ARPF2) of ARPF2-ARRS1 complex & original... 0.05 OrthoFinder output from all 47 species
Azfi_s0388.g067595 No alias component *(ARPF2) of ARPF2-ARRS1 complex & original... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001003.36 No alias Ribosome production factor 2 homolog OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Ehy_g06742 No alias component *(ARPF2) of ARPF2-ARRS1 complex & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01033782001 No alias Ribosome production factor 2 homolog OS=Arabidopsis thaliana 0.09 OrthoFinder output from all 47 species
Gb_27395 No alias component ARPF2 of ARPF2-ARRS1 complex 0.05 OrthoFinder output from all 47 species
LOC_Os01g33030.1 LOC_Os01g33030 component ARPF2 of ARPF2-ARRS1 complex 0.05 OrthoFinder output from all 47 species
Mp4g01500.1 No alias component ARPF2 of ARPF2-ARRS1 complex 0.12 OrthoFinder output from all 47 species
Nbi_g07801 No alias component *(ARPF2) of ARPF2-ARRS1 complex & original... 0.01 OrthoFinder output from all 47 species
Pp3c4_19370V3.1 Pp3c4_19370 Ribosomal RNA processing Brix domain protein 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0097.g019442 No alias component *(ARPF2) of ARPF2-ARRS1 complex & original... 0.01 OrthoFinder output from all 47 species
Sam_g11434 No alias component *(ARPF2) of ARPF2-ARRS1 complex & original... 0.02 OrthoFinder output from all 47 species
Smo73689 No alias Ribosome production factor 2 homolog OS=Oryza sativa... 0.05 OrthoFinder output from all 47 species
Solyc10g083600.2.1 Solyc10g083600 component ARPF2 of ARPF2-ARRS1 complex 0.07 OrthoFinder output from all 47 species
Tin_g41919 No alias component *(ARPF2) of ARPF2-ARRS1 complex & original... 0.02 OrthoFinder output from all 47 species
Zm00001e032080_P001 Zm00001e032080 component ARPF2 of ARPF2-ARRS1 complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0008612 peptidyl-lysine modification to peptidyl-hypusine IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR007109 Brix 47 242
No external refs found!