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Aliases : VAP27, VAP27-1, (AT)VAP, VAP
Description : Vesicle-associated protein 1-1 OS=Arabidopsis thaliana
Gene families : OG0000655 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000655_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G45140 | PVA12 | plant VAP homolog 12 | 0.02 | OrthoFinder output from all 47 species | |
| AT3G60600 | VAP27, VAP27-1,... | vesicle associated protein | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g080054 | VAP27, VAP27-1,... | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g085923 | PVA12 | contact site protein (VAP27) of... | 0.01 | OrthoFinder output from all 47 species | |
| Adi_g088258 | PVA12 | contact site protein (VAP27) of... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g102804 | PVA12 | contact site protein (VAP27) of... | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g05136 | PVA12 | contact site protein (VAP27) of... | 0.01 | OrthoFinder output from all 47 species | |
| Aev_g09805 | PVA12 | contact site protein (VAP27) of... | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g05641 | VAP27, VAP27-1,... | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g03680 | PVA12 | contact site protein (VAP27) of... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g62969 | VAP27, VAP27-1,... | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g27802 | VAP27, VAP27-1,... | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g32115 | PVA12 | contact site protein (VAP27) of... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.31G024900.1 | VAP27, VAP27-1,... | contact site protein (VAP27) of... | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.39G059000.1 | VAP27, VAP27-1,... | contact site protein (VAP27) of... | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g03783 | VAP27, VAP27-1,... | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01001317001 | PVA12 | Vesicle-associated protein 1-1 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g30950.1 | VAP27-2, LOC_Os05g30950 | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os08g05890.1 | LOC_Os08g05890 | contact site protein (VAP27) of... | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os08g06020.1 | PVA12, LOC_Os08g06020 | contact site protein (VAP27) of... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os10g40140.1 | LOC_Os10g40140 | contact site protein (VAP27) of... | 0.01 | OrthoFinder output from all 47 species | |
| Len_g03669 | VAP27, VAP27-1,... | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g17263 | VAP27, VAP27-1,... | contact site protein (VAP27) of... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g00566 | No alias | contact site protein (VAP27) of... | 0.01 | OrthoFinder output from all 47 species | |
| Lfl_g10766 | PVA12 | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species | |
| Mp3g04340.1 | PVA12 | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g03861 | PVA12 | contact site protein (VAP27) of... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g10884 | PVA12 | contact site protein (VAP27) of... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g00706 | VAP27, VAP27-1,... | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g01735 | PVA12 | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g05839 | VAP27, VAP27-1,... | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g16185 | PVA12 | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species | |
| Smo271653 | PVA12 | Vesicle-associated protein 1-2 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g090990.3.1 | Solyc01g090990 | contact site protein (VAP27) of... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc08g078000.3.1 | Solyc08g078000 | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g06544 | PVA12 | contact site protein (VAP27) of... | 0.01 | OrthoFinder output from all 47 species | |
| Spa_g47036 | PVA12 | contact site protein (VAP27) of... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g02524 | VAP27, VAP27-1,... | contact site protein (VAP27) of... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g20156 | PVA12 | contact site protein (VAP27) of... | 0.01 | OrthoFinder output from all 47 species | |
| Tin_g28738 | No alias | contact site protein (VAP27) of... | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e004401_P001 | VAP27, VAP27-1,... | contact site protein (VAP27) of... | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e015243_P002 | PVA12, Zm00001e015243 | contact site protein (VAP27) of... | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e027215_P001 | VAP27-2, Zm00001e027215 | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0005048 | signal sequence binding | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005525 | GTP binding | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| BP | GO:0006621 | protein retention in ER lumen | IEP | HCCA |
| BP | GO:0006629 | lipid metabolic process | IEP | HCCA |
| BP | GO:0006644 | phospholipid metabolic process | IEP | HCCA |
| BP | GO:0006650 | glycerophospholipid metabolic process | IEP | HCCA |
| BP | GO:0006661 | phosphatidylinositol biosynthetic process | IEP | HCCA |
| BP | GO:0006810 | transport | IEP | HCCA |
| BP | GO:0006855 | xenobiotic transmembrane transport | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| BP | GO:0008104 | protein localization | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008610 | lipid biosynthetic process | IEP | HCCA |
| BP | GO:0008654 | phospholipid biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0015031 | protein transport | IEP | HCCA |
| MF | GO:0015291 | secondary active transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015297 | antiporter activity | IEP | HCCA |
| BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
| CC | GO:0030117 | membrane coat | IEP | HCCA |
| CC | GO:0030120 | vesicle coat | IEP | HCCA |
| CC | GO:0030126 | COPI vesicle coat | IEP | HCCA |
| BP | GO:0032507 | maintenance of protein location in cell | IEP | HCCA |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| BP | GO:0033036 | macromolecule localization | IEP | HCCA |
| MF | GO:0033218 | amide binding | IEP | HCCA |
| BP | GO:0035437 | maintenance of protein localization in endoplasmic reticulum | IEP | HCCA |
| MF | GO:0042277 | peptide binding | IEP | HCCA |
| BP | GO:0042908 | xenobiotic transport | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| BP | GO:0045017 | glycerolipid biosynthetic process | IEP | HCCA |
| BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
| BP | GO:0045185 | maintenance of protein location | IEP | HCCA |
| BP | GO:0046474 | glycerophospholipid biosynthetic process | IEP | HCCA |
| BP | GO:0046486 | glycerolipid metabolic process | IEP | HCCA |
| BP | GO:0046488 | phosphatidylinositol metabolic process | IEP | HCCA |
| BP | GO:0046854 | phosphatidylinositol phosphate biosynthetic process | IEP | HCCA |
| BP | GO:0046907 | intracellular transport | IEP | HCCA |
| MF | GO:0046923 | ER retention sequence binding | IEP | HCCA |
| BP | GO:0051179 | localization | IEP | HCCA |
| BP | GO:0051234 | establishment of localization | IEP | HCCA |
| BP | GO:0051235 | maintenance of location | IEP | HCCA |
| BP | GO:0051641 | cellular localization | IEP | HCCA |
| BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
| BP | GO:0051651 | maintenance of location in cell | IEP | HCCA |
| BP | GO:0055085 | transmembrane transport | IEP | HCCA |
| BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
| BP | GO:0071702 | organic substance transport | IEP | HCCA |
| BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
| BP | GO:0072595 | maintenance of protein localization in organelle | IEP | HCCA |
| CC | GO:0098796 | membrane protein complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000535 | MSP_dom | 9 | 109 |
| No external refs found! |