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  5. Cre03.g183350

Cre03.g183350 (CHR24)


Aliases : CHR24

Description : Protein CHROMATIN REMODELING 24 OS=Arabidopsis thaliana


Gene families : OG0005354 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005354_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre03.g183350
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0558.g076902 CHR24 chromatin remodeling factor *(ERCC6) & original... 0.03 OrthoFinder output from all 47 species
Ceric.22G065600.1 CHR24, Ceric.22G065600 not classified & original description: pacid=50613904... 0.05 OrthoFinder output from all 47 species
Gb_17075 CHR24 chromatin remodeling factor (ERCC6) 0.02 OrthoFinder output from all 47 species
LOC_Os04g59624.2 CHR24, LOC_Os04g59624 chromatin remodeling factor (ERCC6) 0.02 OrthoFinder output from all 47 species
MA_18372g0010 CHR24 Protein CHROMATIN REMODELING 24 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp1g29760.1 CHR24 chromatin remodeling factor (ERCC6) 0.06 OrthoFinder output from all 47 species
Msp_g36236 CHR24 chromatin remodeling factor *(ERCC6) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g03168 CHR24 chromatin remodeling factor *(ERCC6) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0058.g014982 CHR24 chromatin remodeling factor *(ERCC6) & original... 0.01 OrthoFinder output from all 47 species
Solyc01g068280.3.1 CHR24, Solyc01g068280 chromatin remodeling factor (ERCC6) 0.02 OrthoFinder output from all 47 species
Zm00001e007521_P001 CHR24, Zm00001e007521 chromatin remodeling factor (ERCC6) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001650 Helicase_C 844 952
IPR000330 SNF2_N 369 615
No external refs found!