Cre03.g179961 (TIL1, POL2A, ABO4,...)

Aliases : TIL1, POL2A, ABO4, EMB2284, ESD7, EMB142, EMB529

Description : Cell cycle.interphase.DNA replication.elongation.DNA polymerase epsilon complex.POL2/POLE1 catalytic component

Gene families : OG0005358 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005358_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre03.g179961
Cluster	HCCA: Cluster_18

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00040p00175760	TIL1, POL2A,...	Cell cycle.interphase.DNA replication.elongation.DNA...	0.09	OrthoFinder output from all 47 species
AMTR_s00040p00177210	TIL1, POL2A,...	Cell cycle.interphase.DNA replication.elongation.DNA...	0.08	OrthoFinder output from all 47 species
Als_g16530	TIL1, POL2A,...	catalytic component *(POL2/POLE1) of DNA polymerase...	0.04	OrthoFinder output from all 47 species
Aop_g15250	TIL1, POL2A,...	catalytic component *(POL2/POLE1) of DNA polymerase...	0.05	OrthoFinder output from all 47 species
Aspi01Gene24972.t1	TIL1, POL2A,...	catalytic component *(POL2/POLE1) of DNA polymerase...	0.02	OrthoFinder output from all 47 species
Ceric.10G003400.1	TIL1, POL2A,...	catalytic component *(POL2/POLE1) of DNA polymerase...	0.11	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000970.30	TIL1, POL2A,...	Cell cycle.interphase.DNA replication.elongation.DNA...	0.05	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000970.31	TIL2, POL2B	DNA polymerase epsilon catalytic subunit A...	0.05	OrthoFinder output from all 47 species
Dac_g06701	TIL1, POL2A,...	catalytic component *(POL2/POLE1) of DNA polymerase...	0.03	OrthoFinder output from all 47 species
Dcu_g42121	TIL1, POL2A,...	catalytic component *(POL2/POLE1) of DNA polymerase...	0.06	OrthoFinder output from all 47 species
GSVIVT01031365001	TIL1, POL2A,...	Cell cycle.interphase.DNA replication.elongation.DNA...	0.07	OrthoFinder output from all 47 species
Gb_06608	TIL1, POL2A,...	catalytic component POL2/POLE1 of DNA polymerase epsilon complex	0.04	OrthoFinder output from all 47 species
LOC_Os02g30800.1	TIL1, POL2A,...	catalytic component POL2/POLE1 of DNA polymerase epsilon complex	0.11	OrthoFinder output from all 47 species
Len_g09288	TIL1, POL2A,...	catalytic component *(POL2/POLE1) of DNA polymerase...	0.02	OrthoFinder output from all 47 species
MA_10433902g0010	TIL1, POL2A,...	DNA polymerase epsilon catalytic subunit A...	0.05	OrthoFinder output from all 47 species
MA_80165g0010	TIL1, POL2A,...	catalytic component POL2/POLE1 of DNA polymerase epsilon complex	0.08	OrthoFinder output from all 47 species
MA_88369g0010	TIL1, POL2A,...	catalytic component POL2/POLE1 of DNA polymerase epsilon complex	0.06	OrthoFinder output from all 47 species
Mp3g08150.1	TIL1, POL2A,...	catalytic component POL2/POLE1 of DNA polymerase epsilon complex	0.02	OrthoFinder output from all 47 species
Msp_g32528	TIL1, POL2A,...	catalytic component *(POL2/POLE1) of DNA polymerase...	0.02	OrthoFinder output from all 47 species
Nbi_g08627	TIL1, POL2A,...	catalytic component *(POL2/POLE1) of DNA polymerase...	0.03	OrthoFinder output from all 47 species
Smo442263	TIL1, POL2A,...	Cell cycle.interphase.DNA replication.elongation.DNA...	0.04	OrthoFinder output from all 47 species
Solyc11g067110.2.1	TIL1, POL2A,...	DNA polymerase epsilon catalytic subunit A...	0.02	OrthoFinder output from all 47 species
Solyc11g067140.2.1	TIL1, POL2A,...	catalytic component POL2/POLE1 of DNA polymerase epsilon complex	0.03	OrthoFinder output from all 47 species
Spa_g06995	TIL1, POL2A,...	catalytic component *(POL2/POLE1) of DNA polymerase...	0.07	OrthoFinder output from all 47 species
Tin_g44285	TIL1, POL2A,...	catalytic component *(POL2/POLE1) of DNA polymerase...	0.03	OrthoFinder output from all 47 species
Zm00001e014636_P002	TIL1, POL2A,...	catalytic component POL2/POLE1 of DNA polymerase epsilon complex	0.1	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003887	DNA-directed DNA polymerase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006260	DNA replication	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016779	nucleotidyltransferase activity	None	Extended
MF	GO:0034061	DNA polymerase activity	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0003690	double-stranded DNA binding	IEP	HCCA
MF	GO:0003774	cytoskeletal motor activity	IEP	HCCA
MF	GO:0003777	microtubule motor activity	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
BP	GO:0006281	DNA repair	IEP	HCCA
BP	GO:0006298	mismatch repair	IEP	HCCA
BP	GO:0007017	microtubule-based process	IEP	HCCA
BP	GO:0007018	microtubule-based movement	IEP	HCCA
MF	GO:0008017	microtubule binding	IEP	HCCA
MF	GO:0008092	cytoskeletal protein binding	IEP	HCCA
MF	GO:0015631	tubulin binding	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0030983	mismatched DNA binding	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013697	DNA_pol_e_suA_C	1776	1888
IPR013697	DNA_pol_e_suA_C	1563	1759
IPR006133	DNA-dir_DNA_pol_B_exonuc	119	499

External Links

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Cre03.g179961 (TIL1, POL2A, ABO4,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation