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  5. Cre03.g163700

Cre03.g163700


No description available


Gene families : OG0006115 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006115_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre03.g163700
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AT1G18850 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.08 OrthoFinder output from all 47 species
Ceric.19G063800.1 Ceric.19G063800 not classified & original description: pacid=50575292... 0.02 OrthoFinder output from all 47 species
Dde_g09861 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Mp2g01310.1 No alias no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
Ore_g07287 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g37614 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!