1. Home
  2. Species
  3. Chlamydomonas reinhardtii
  4. Sequence
  5. Cre03.g158900

Cre03.g158900 (EMB3003)


Aliases : EMB3003

Description : Lipid metabolism.fatty acid synthesis.acetyl-CoA generation.plastidial pyruvate dehydrogenase complex.E2 dihydrolipoamide acetyltransferase component


Gene families : OG0003205 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003205_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre03.g158900
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00107590 LTA2, PLE2,... Lipid metabolism.fatty acid synthesis.acetyl-CoA... 0.05 OrthoFinder output from all 47 species
AMTR_s00180p00054930 EMB3003,... Lipid metabolism.fatty acid synthesis.acetyl-CoA... 0.05 OrthoFinder output from all 47 species
AT1G34430 EMB3003 2-oxoacid dehydrogenases acyltransferase family protein 0.06 OrthoFinder output from all 47 species
AT3G25860 LTA2, PLE2 2-oxoacid dehydrogenases acyltransferase family protein 0.06 OrthoFinder output from all 47 species
Aev_g28403 LTA2, PLE2 EC_2.3 acyltransferase & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g08037 LTA2, PLE2 EC_2.3 acyltransferase & original description: none 0.01 OrthoFinder output from all 47 species
Als_g03762 EMB3003 EC_2.3 acyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05120 LTA2, PLE2 EC_2.3 acyltransferase & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g06650 EMB3003 EC_2.3 acyltransferase & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g11385 LTA2, PLE2 EC_2.3 acyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene65095.t1 LTA2, PLE2,... EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0017.g014583 EMB3003 EC_2.3 acyltransferase & original description: CDS=106-1797 0.02 OrthoFinder output from all 47 species
Ceric.12G023000.1 EMB3003, Ceric.12G023000 EC_2.3 acyltransferase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.36G026000.1 LTA2, PLE2,... EC_2.3 acyltransferase & original description:... 0.06 OrthoFinder output from all 47 species
Dac_g00894 EMB3003 EC_2.3 acyltransferase & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01011909001 LTA2, PLE2 Lipid metabolism.fatty acid synthesis.acetyl-CoA... 0.01 OrthoFinder output from all 47 species
GSVIVT01034492001 EMB3003 Lipid metabolism.fatty acid synthesis.acetyl-CoA... 0.02 OrthoFinder output from all 47 species
Gb_08969 LTA2, PLE2 dihydrolipoamide acetyltransferase component E2 of... 0.03 OrthoFinder output from all 47 species
LOC_Os08g33440.1 LTA2, PLE2,... dihydrolipoamide acetyltransferase component E2 of... 0.04 OrthoFinder output from all 47 species
LOC_Os12g08170.1 EMB3003, LOC_Os12g08170 dihydrolipoamide acetyltransferase component E2 of... 0.04 OrthoFinder output from all 47 species
Len_g18518 EMB3003 EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06073 EMB3003 EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
MA_10234164g0010 LTA2, PLE2 dihydrolipoamide acetyltransferase component E2 of... 0.02 OrthoFinder output from all 47 species
MA_10433674g0010 EMB3003 dihydrolipoamide acetyltransferase component E2 of... 0.03 OrthoFinder output from all 47 species
Mp4g18690.1 EMB3003 dihydrolipoamide acetyltransferase component E2 of... 0.03 OrthoFinder output from all 47 species
Nbi_g14293 EMB3003 EC_2.3 acyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g48678 LTA2, PLE2 EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g19115 No alias EC_2.3 acyltransferase & original description: none 0.01 OrthoFinder output from all 47 species
Solyc05g009530.3.1 LTA2, PLE2,... dihydrolipoamide acetyltransferase component E2 of... 0.05 OrthoFinder output from all 47 species
Solyc11g017250.2.1 EMB3003, Solyc11g017250 dihydrolipoamide acetyltransferase component E2 of... 0.06 OrthoFinder output from all 47 species
Spa_g31116 LTA2, PLE2 EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g00992 EMB3003 EC_2.3 acyltransferase & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e004154_P002 LTA2, PLE2,... dihydrolipoamide acetyltransferase component E2 of... 0.03 OrthoFinder output from all 47 species
Zm00001e018405_P001 EMB3003, Zm00001e018405 dihydrolipoamide acetyltransferase component E2 of... 0.03 OrthoFinder output from all 47 species
Zm00001e022439_P001 LTA2, PLE2,... dihydrolipoamide acetyltransferase component E2 of... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016746 acyltransferase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004366 glycerol-3-phosphate O-acyltransferase activity IEP HCCA
MF GO:0004751 ribose-5-phosphate isomerase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0015994 chlorophyll metabolic process IEP HCCA
BP GO:0015995 chlorophyll biosynthetic process IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP HCCA
MF GO:0050662 obsolete coenzyme binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR004167 PSBD 186 221
IPR000089 Biotin_lipoyl 36 106
IPR001078 2-oxoacid_DH_actylTfrase 272 493
No external refs found!